Gene Information

Name : YPDSF_3716 (YPDSF_3716)
Accession : YP_001165039.1
Strain : Yersinia pestis Pestoides F
Genome accession: NC_009381
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4267733 - 4268365 bp
Length : 633 bp
Strand : +
Note : -

DNA sequence : 
ATGAATACTAAATTATTGATTGTCGACGATCATGAACTCATTATTCATGGCATCAAGAATATGCTGGCCGCCTATCCGCG
CTACCTGATTGTAGGCCAAGCGGATAATGGACTTGAAGTGTATAACTTGTGCCGCCAAACTGAACCTGACATGGTCATTC
TGGATTTAGGATTACCCGGTATGGATGGCCTTGATGTTATCATTCAGTTGCTTCGCCGTTGGCCAGCCCTGAAGATCCTG
ACGTTAACCGCCCGCAATGAAGAACACTATGCCAGCAGAACATTCAACAGTGGAGCCTTAGGTTATGTGCTGAAGAAAAG
TCCCCAGCAAATCCTGATGGCAGCCATTCAAACCGTCGCAATAGGTAAACGTTATATTGACCCCGCCCTTGATGCCTCTA
TGGTAATAAAACTGACCCAAGGATCCGATAATACGCCCCCGGTTCTGACACCTCGCGAGCGGCAGATATTAAAACTTATC
ACCGAGGGATCGTGTAATCGAGTTATTGCTGCTCAACTTTCTATCAGCCAAAAAACCGTCGAAACACATCGGCTGAATAT
GATGAAAAAATTGGATGTACATAAAGTCGCAGAACTTATTCACTGGTCATACCGATTAGGCTTGAATGTCTAA

Protein sequence : 
MNTKLLIVDDHELIIHGIKNMLAAYPRYLIVGQADNGLEVYNLCRQTEPDMVILDLGLPGMDGLDVIIQLLRRWPALKIL
TLTARNEEHYASRTFNSGALGYVLKKSPQQILMAAIQTVAIGKRYIDPALDASMVIKLTQGSDNTPPVLTPRERQILKLI
TEGSCNRVIAAQLSISQKTVETHRLNMMKKLDVHKVAELIHWSYRLGLNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 7e-89 100
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 6e-41 56
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 5e-41 56
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 5e-41 56
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 5e-41 56
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 1e-35 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPDSF_3716 YP_001165039.1 two-component response regulator VFG0492 Protein 2e-41 56
YPDSF_3716 YP_001165039.1 two-component response regulator VFG2440 Protein 1e-25 41