Gene Information

Name : deoA (YPDSF_3196)
Accession : YP_001164527.1
Strain : Yersinia pestis Pestoides F
Genome accession: NC_009381
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.4
Position : 3639439 - 3640854 bp
Length : 1416 bp
Strand : -
Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate

DNA sequence :
ATGCACAGTAGGCTGAAGGCCTGCTGTGTCGCTATTTCCGAAAGCGCCTGTGGGCGGCTTTCATCCCATATTCCGGTCAA
GCAGGGGGATGCCTTGTTTCTGGCACAAGAAATTATCCGTAAAAAACGCGACGGTCAGCCATTGAGCGAAGAAGAGATTC
GTTTTTTTATCAATGGGATCCGCGATAACGTTGTTTCTGAAGGGCAAATTGCCGCTTTAGCGATGACCATTTATTTCCAC
GACATGAGCATGCCTGAGCGCGTTGCGCTGACCATGGCGATGCGTGATTCCGGTACTGTGCTGAATTGGAAGAGCCTGAA
TCTGAATGGCCCGCTGGTCGATAAGCACTCCACTGGTGGCGTGGGTGATGTGACGTCACTGATGCTTGGCCCGATGGTGG
CAGCCTGCGGCGGCTATGTGCCGATGATCTCTGGCCGTGGTCTTGGTCATACCGGCGGCACACTGGATAAACTGGAGGCG
ATCCCCGGTTTTGATATTTTCCCGGATGATAATGCGTTCCGCAAAATTATTCAGAATGTTGGTGTGGCGATTATCGGCCA
AACCAGCTCGCTGGCCCCTGCCGATAAGCGTTTTTACGCGACCCGCGATATTACGGCAACAGTCGATTCTATTCCATTGA
TTACGGCCTCTATTCTGGCCAAAAAATTGGCGGAAGGGCTGGATGCATTGGTCATGGACGTGAAGGTCGGCTCCGGTGCC
TTTATGCCAACCTACTCGTTGTCGGCTGATTTGGCGCAGGCGATTGTTGGTGTGGCAAACGGTGCGGGTTGCAAAACCAC
GGCGCTACTGACGGACATGAACCAAGTCCTGGCGTCCAGCGCCGGTAATGGGGTCGAAGTCCGCGAAGCTGTGCGTTTCC
TGACGGGCGAATATCGCAACCCACGTTTGCTGGAAGTGACTATGGCGCTGTGTGTTGAAATGTTGCTGTCAGGCGGTTTA
GCGCACGATGAAGCCGATGCCCGTGCCAAGCTGCAAGCCGTTTTGGATAATGGCAAAGCGGCGGAAGTCTTTGGCCGTAT
GGTGGCCGCGCAAAAAGGCCCGGCAGACTTTGTTGAACGCTATGACAGCTACCTGCCCGTTGCTACCCTAAGCAAACCGG
TATTTGCTGAACAGACGGGAATCATTACTGCAATGGATACCCGCGCCTTGGGTATGGCGGTGGTCGCCCTCGGCGGGGGA
CGCCGTCGGGCAACGGATCCCATTGATTATAGTGTAGGGCTGACGGAGATGGCCCGTTTGGGTACCCGTGTTGATGGGCA
GCAGCCGCTTGCGGTGATCCATGCCAATAACGAAGATGACTGGCAGCAGGCGGCAGAGGTTGTGCGTGCGGCCATCACCT
TAGGGAATAACACGCCAGAAGAAACGCCAGTGATTTATCGCCGTATCACTGAATAA

Protein sequence :
MHSRLKACCVAISESACGRLSSHIPVKQGDALFLAQEIIRKKRDGQPLSEEEIRFFINGIRDNVVSEGQIAALAMTIYFH
DMSMPERVALTMAMRDSGTVLNWKSLNLNGPLVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLEA
IPGFDIFPDDNAFRKIIQNVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGA
FMPTYSLSADLAQAIVGVANGAGCKTTALLTDMNQVLASSAGNGVEVREAVRFLTGEYRNPRLLEVTMALCVEMLLSGGL
AHDEADARAKLQAVLDNGKAAEVFGRMVAAQKGPADFVERYDSYLPVATLSKPVFAEQTGIITAMDTRALGMAVVALGGG
RRRATDPIDYSVGLTEMARLGTRVDGQQPLAVIHANNEDDWQQAAEVVRAAITLGNNTPEETPVIYRRITE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 5e-65 42