Gene Information

Name : YPDSF_0303 (YPDSF_0303)
Accession : YP_001161695.1
Strain : Yersinia pestis Pestoides F
Genome accession: NC_009381
Putative virulence/resistance : Unknown
Product : trehalose-6-phosphate hydrolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : 3.2.1.93
Position : 345283 - 346950 bp
Length : 1668 bp
Strand : -
Note : -

DNA sequence :
ATGAATAATCCAATCCCTTGGTGGCAACATGGTGTCATCTATCAGATTTACCCGAAGAGCTTTCAGGACAGTACCGGTAA
TGGCTATGGTGACCTGGCAGGCGTTGCGCAGCGGCTGGATTATCTGCAAAAGCTGGGCGTTGATGCCATTTGGCTGACAC
CGGTGTATGTCTCGCCACAAGTGGATAACGGTTATGACGTGGCGGATTACTGCGCCATTGACCCCGCTTATGGCACATTG
GATGACTTTAAACGTTTGGTCGCGGGTGCTCATCAGCGAGGCATACGCATCATCATGGATATGGTGTTCAATCACACCTC
CACAGAACATGCCTGGTTTAAAGCTTCGCAGGATCGTAATAGCCCTTATCGGCAATTTTATATTTGGCGTGACGGTGACG
GTGGAGACGGCAGTTTACCGAATAACTGGCGCTCGAAATTCGGTGGTCACGCATGGCAGTGGCACGCGGCCAGCGGCCAG
TATTATCTGCATTTGTTTGCCCCAGAGCAGGCTGATCTGAATTGGGAACACCAACCGGTACGCGATGAGCTCAAAAAGGT
GTGTGAATTTTGGGCCGATCTGGGGGTTGATGGTCTGCGTTTGGATGTCATCAATCTGGTGTCCAAACAGCAGGATTTCC
CTAATGATCTGGACGGCGATGGCCGCCGTTTTTATACCGATGGCCCACGCATTCATGAGTTTTTGCAGGAACTGAGCCGC
GATGTGTTCCAGCCACGCCGCCTGATGACGGTAGGCGAGATGTCATCCACCCGTCTCGAGCATTGTCAGCGATATGCGGC
ATTAGGCGGTGATGAGTTATCCATGACCTTTAATTTCCATCACCTGAAAGTGGATTATCTTAACGGTGAAAAGTGGTCAT
TGATGCCGCCGAATCGGGTGGAGTTGAAACACATTTTTAATCAGTGGCAGCAAGGGATGCACAACCGAGCATGGAACGCA
CTATTTTGGTGTAATCACGATCAACCACGCATTGTCTCGCGTTTTGGTCATGAAGGCGCACTACGTTTGCCAGCGGCAAA
GATGCTGGCGATGGTACTGCACGGTATGCAGGGCACGCCTTATATTTATCAGGGGGAAGAAATTGGCATGACGAACCCCA
ATTTCACTGATATCACTCAATACCGTGATGTTGAAAGCCTGAATATGTTTGCCGAACTGAGTGTGGCAGGCCGCGAACCC
GATGAGTTATTGGCGATTCTGGCAGCTAAATCCCGTGATAATAGCCGTACCCCCATGCAATGGGATAGCAGCGATAATGC
GGGTTTCAGCCAAGGCACTCCCTGGATTGCCCCTTGCAGCAATTATCATGAGATTAACGTTAATGCCGCATTGGCCGACG
CTGACTCGGTGTTTTATGCCTATCAATACCTGATAGCCCTGCGTAAACAATACGATATTTTCACTTTCGGTGATTATCAG
GATCTTTGCCCACAGCACCCTGATTTATGGTGCTATTTGCGCAGTTGGCAAGGGAAGCAACTGTTGGTAGTCGCTAACCT
GAGTGAAGAGCCCCAGCGATGGCAACCCGAGGGCCTCACGCTGGACGGTAATTGGCAATTATTGATGAGCAGCTACGACC
AAAGCGCCTTCCAACCGCAAGATATGATATTACGCGGATATGAGGGGATTTATTGGGTATGTGAGTAA

Protein sequence :
MNNPIPWWQHGVIYQIYPKSFQDSTGNGYGDLAGVAQRLDYLQKLGVDAIWLTPVYVSPQVDNGYDVADYCAIDPAYGTL
DDFKRLVAGAHQRGIRIIMDMVFNHTSTEHAWFKASQDRNSPYRQFYIWRDGDGGDGSLPNNWRSKFGGHAWQWHAASGQ
YYLHLFAPEQADLNWEHQPVRDELKKVCEFWADLGVDGLRLDVINLVSKQQDFPNDLDGDGRRFYTDGPRIHEFLQELSR
DVFQPRRLMTVGEMSSTRLEHCQRYAALGGDELSMTFNFHHLKVDYLNGEKWSLMPPNRVELKHIFNQWQQGMHNRAWNA
LFWCNHDQPRIVSRFGHEGALRLPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPNFTDITQYRDVESLNMFAELSVAGREP
DELLAILAAKSRDNSRTPMQWDSSDNAGFSQGTPWIAPCSNYHEINVNAALADADSVFYAYQYLIALRKQYDIFTFGDYQ
DLCPQHPDLWCYLRSWQGKQLLVVANLSEEPQRWQPEGLTLDGNWQLLMSSYDQSAFQPQDMILRGYEGIYWVCE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-121 45