|
Name : YPDSF_2928 (YPDSF_2928) Accession : YP_001164263.1 Strain : Yersinia pestis Pestoides F Genome accession: NC_009381 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3323403 - 3324959 bp Length : 1557 bp Strand : - Note : - DNA sequence : ATGATAAGGCCCCATCAAATGGCTGAATTTATAGTGTCCTCATTTGAAACAATTAGTGATGAATTACACCTTCTCTGTCG GCGTTATCGGGCAGTGGCACTCACTCTTGATGGTAAAAGCCTTTCGATAGCTTCAGCCCAGACCGTTGATGAAGCGTTAT TGACCGCGTTGCGTTTCACATGTGGCCGTCAAGTCAGAGTGGAATATTGGCCCGAAGCCAAGATTGAACAATCATTGTAT TTGGGGAGCCCGACGAAAAATAACCTAAACAGTAGTATTAACAACGGGCTAAATAGCGCGTTGTTATCCCAAAAGGGAGG TGATCCGTCGCGAGTAAAACCGCACAATCAGCAGCAACAGACAATAGATGATACTGTGTTTGATAATGAGAGTGACACAC CCGTCATTCAATTCATAACCCAGACGCTAAGTCTAGCCATTCAAAAACGCGCTTCAGATATCCATTTTGAGCCTTATCAA CACCACTATCGTGTTCGTTTAAGAATTGATGGTGTGTTGCATGAATTCACCCCACCCGAGGCCGAATGGGCAGCTCGGAT TAGCAGTTGCCTGAAGGTCATGGCGAAATTAAATATTGCTGAACGGCGATTACCACAAGATGGTCAACTAACCTTACCCT TTGGTGATTCACACTATTCAATGCGGATAGCGACTCTCCCTACGCAATATGGTGAAAAAGTGGTATTGCGTATTCTTCAA ATACAACAGCAAACCACGTTAGAAAAGCTGGGGATGACGGATGCGGCACTGAAACAATTAACACAGGCATTATCAGCACC ACAAGGGCTGATTCTGGTCACCGGCCCTACCGGTAGTGGCAAAACCATTACGTTATATTGCAGTTTAGCGCGGCTGAATC AGACACAAAGAAACATCTGTAGCGTCGAAGATCCTATTGAGATCCCCGTCAATGGCATTAACCAAACCCAGGTAAACAGC AAGATCGGTCTGGATTTCTCTCGAATACTACGAGCCATCCTACGACAGGACCCTGATGTCATTATGGTTGGTGAAATTCG TGATAATGAAACCGCCAGTATCGCAGTTAACGCGGCCCAGACCGGGCATTTGGTCCTATCGACGCTGCACACTAACTCAA CAGCAGAAACGCTGATACGCATGGCACAAATGGGAATAGAACGCCATTTAATCGCCTCAAGTCTAAAACTCGTCATTGCT CAACGCTTGGTGCGCCGCCTATGTTTACATTGCCGCCAGGCTGCATCTCACCCCTTTATTCCACCAGCTCACATAAGGTC TGGTCCGATCCAACACTATCTAGCTGTAGGTTGTGAGCATTGTTGTACGGGTTATTATGGCCGAACGGGTATTTATGAAA TGCTGAGTGTAACGCCGCAGATTCAGCAAGCCATACTCAATAATGCCAGCCCTGTAAAACTGGTACAAATTGCCCAGAAG CAAGAACAAACAGCCTTACTCTGCTCAGGTTTAGCTTTAATCGAAAAAGGCATCACTACCCTTAGTGAAATTAATCGTGT TGTGGGCTTCGTAGCAGAAACAGAGGTCACCTCTTGA Protein sequence : MIRPHQMAEFIVSSFETISDELHLLCRRYRAVALTLDGKSLSIASAQTVDEALLTALRFTCGRQVRVEYWPEAKIEQSLY LGSPTKNNLNSSINNGLNSALLSQKGGDPSRVKPHNQQQQTIDDTVFDNESDTPVIQFITQTLSLAIQKRASDIHFEPYQ HHYRVRLRIDGVLHEFTPPEAEWAARISSCLKVMAKLNIAERRLPQDGQLTLPFGDSHYSMRIATLPTQYGEKVVLRILQ IQQQTTLEKLGMTDAALKQLTQALSAPQGLILVTGPTGSGKTITLYCSLARLNQTQRNICSVEDPIEIPVNGINQTQVNS KIGLDFSRILRAILRQDPDVIMVGEIRDNETASIAVNAAQTGHLVLSTLHTNSTAETLIRMAQMGIERHLIASSLKLVIA QRLVRRLCLHCRQAASHPFIPPAHIRSGPIQHYLAVGCEHCCTGYYGRTGIYEMLSVTPQIQQAILNNASPVKLVQIAQK QEQTALLCSGLALIEKGITTLSEINRVVGFVAETEVTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-72 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-72 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPDSF_2928 | YP_001164263.1 | hypothetical protein | VFG0112 | Protein | 4e-84 | 48 |
| YPDSF_2928 | YP_001164263.1 | hypothetical protein | VFG2426 | Protein | 8e-75 | 46 |
| YPDSF_2928 | YP_001164263.1 | hypothetical protein | VFG2048 | Protein | 4e-74 | 46 |
| YPDSF_2928 | YP_001164263.1 | hypothetical protein | VFG0182 | Protein | 2e-70 | 46 |
| YPDSF_2928 | YP_001164263.1 | hypothetical protein | VFG0233 | Protein | 5e-76 | 46 |
