|
Name : ribD (YPDSF_2818) Accession : YP_001164153.1 Strain : Yersinia pestis Pestoides F Genome accession: NC_009381 Putative virulence/resistance : Unknown Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 3192205 - 3193314 bp Length : 1110 bp Strand : - Note : riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a DNA sequence : ATGCAGCCCGATGAGTTCTATATGGCCCGAGCTTTTGAACTGGCGCGTTTGGGGCGCTTTACGACGTCGCCTAACCCCAA TGTAGGCTGTGTCTTGGTTCGTGATGGCGAGATCGTCGGCGAAGGTTACCACTTACGTGCTGGAGAGCCGCATGCTGAAG TGCATGCGTTACGTATGGCGGGTGAGAAAGCGCGAGGAGCCACGGCTTATGTCACTCTTGAGCCGTGTAGCCATTATGGT CGGACGCCACCTTGTGCTGATGCGTTGGTCGCCGCAGGTGTGATACGGGTTGTTGCTGCCATGCAGGATCCTAATCCAGA AGTTGCCGGGCGAGGGCTGTATAAATTAAAACAGGCCGGTATCGCTGTCGATCATGGCTTGATGTTAGCTGAGGCCGAGG CTGTTAACCTTGGTTTCTTGAAGCGTATGCGGACTGGTTTCCCTTATGTGCAATTGAAAATGGCGGCATCATTGGACGGG CGTACAGCCATGGCATCAGGTGAGAGCCAGTGGATTACCTCACCACAGGCACGCCAGGATGTGCAACGCTTTAGGGCCGA GAGTTCAGCTATTCTCAGTACCAGTGCCACAGTATTGGCAGATGACCCTTCGCTGACGGTACGCTGGCAGGATTTAGATG CCGAAACGCAGGTTTTGTATCCTCATGATAGTGTTCGACAGCCAGTAAAAATTATACTCGATAGCCATAACCGCGTGACT CCACGGCATAAAGTGATACAGCAAGACGGCCCATGCTGGCTGGCTCGCGTAGATGCCGATGATCAGCCATGGCCTGGCAA TATCGAACAACTGTTGCTACCACGTTATGGTAATGGCGTGGACTTGGTTGTGTTGATGATGCAATTGGGGAAACGGAATA TTAACTCTGTCTGGGTAGAGGCTGGGCCACAACTGGCGGGTGCATTGTTACAAGCCGGAGTGGTGGATGAGTTAATCCTT TATATCGCCCCCAAACTCTTGGGCAGTGATGCGCGTGGATTATGCGAGCTAGCTGGGCTGACGAATTTATCGCAAGCGCC TGAGTTTGCATTTAGCGATGTACGGCTGGTCGGTCCGGACTTGCGTTTACGCTTGAAGCCAAAGTATTAA Protein sequence : MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHYG RTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAVDHGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDG RTAMASGESQWITSPQARQDVQRFRAESSAILSTSATVLADDPSLTVRWQDLDAETQVLYPHDSVRQPVKIILDSHNRVT PRHKVIQQDGPCWLARVDADDQPWPGNIEQLLLPRYGNGVDLVVLMMQLGKRNINSVWVEAGPQLAGALLQAGVVDELIL YIAPKLLGSDARGLCELAGLTNLSQAPEFAFSDVRLVGPDLRLRLKPKY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-59 | 49 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-59 | 49 |
