Gene Information

Name : Strop_0957 (Strop_0957)
Accession : YP_001157812.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1071343 - 1072848 bp
Length : 1506 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase

DNA sequence :
ATGACGCGTTACGACGCGCCCACCCACTGGCAGTCCCGCTACGACCACTTCATTGGCGGCGACTACGTCAAGCCGCATGG
CGGGCGGTACTTCGAGAACCCGACCCCGGTGACCGGGCAGCCCTTCTGTGAGGTGGCCCGGGGTACCGCCGAGGACGTGG
AGCGGGCCATCGACGCCGCGCACGGCGCCGCCGGGGCCTGGGGGCGCACCCCGGCCGCCGACCGCGCCATGGTCCTCAAC
CGGGTCGCCGATCGGATGCAGGAACACCTGAAAGCCCTGGCGATCGCGGAGACCTGGGAGAACGGCAAGCCGATACGCGA
GACGCTCGCCGCCGACATTCCACTCGCGATCGACCACTTCCGCTACTTCGCCGGCGTAATCCGGGCCCAGGAGGGTTCCC
TGGCCGAGATCGACAATGACACCGTCGCATACCACTTCCATGAGCCGCTCGGTGTGGTCGGGCAGATCATCCCGTGGAAC
TTCCCGCTGCTGATGGCAACCTGGAAGCTCGCCCCGGCACTCGCGGCCGGCAACGCGGTGGTGCTCAAGCCCGCCGAGCA
GACGCCCGCGTCAATCCACTACCTGCTGTCCCTGGTGGCCGACCTGCTGCCGCCGGGAGTGGTCAACGTCGTCAACGGCT
TCGGGGTCGAGGCGGGCCGGCCGCTGGCGTCCTCGCCGCGAGTGGCCAAGGTGGCGTTCACCGGCGAAACCACGACCGGG
CGACTGATCATGCAGTACGCCAGCGAGAACATCAAGCCGGTCACCCTGGAGCTGGGCGGCAAGAGCCCGAACATCTTCTT
CGACGACGTCAGCGCGGCGCCGGACGACTTCCGCGACAAGGCGCTCGAGGGTTTCACCATGTTCGCCCTGAACCAGGGCG
AGGTCTGCACCTGCCCGTCGCGGGCGCTGATCCAGCAGGGCCACTACGCCGACTTTCTGGCTGCGGCCGTCGCGCGGACC
CGCGAGATCAAGCCGGGGCACCCGTTGGACAGCGCAACGATGGTCGGCGCGCAGGCGTCCAACGACCAGCTCGAGAAGAT
TCTTTCCTATCTGGACATTGGCCGGCAGGAAGGCGCCCGGGTGCTGACCGGTGGCGCACGCGCGGACTTGGGCGGCGAGC
TGTCCGGTGGGTACTACGTCGAGCCAACGATCTTCGAGGGCAGCAACTCGATGCGAATCTTCCAGGAGGAGATCTTCGGC
CCGGTCGTGTCGGTAACCTCCTTCGCTGACCTCGACGACGCGGTAAAGATCGCCAACGACACCCTGTACGGACTCGGTGC
TGGCGTCTGGACTCGAGACATAAATAAGGCGTACCGGGCAGGACGGGCTATCCAGGCAGGGCGGGTCTGGACAAACTGCT
ACCACGCGTACCCCGCGCACGCCGCGTTCGGCGGGTACAAGCAGTCCGGGATCGGCCGGGAGAACCACAAGATGATGCTG
GACCACTACCAGCAGACCAAGAACCTGCTGGTCAGCTACGGTCCGAAGAAGTTGGGCTTCTTCTGA

Protein sequence :
MTRYDAPTHWQSRYDHFIGGDYVKPHGGRYFENPTPVTGQPFCEVARGTAEDVERAIDAAHGAAGAWGRTPAADRAMVLN
RVADRMQEHLKALAIAETWENGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLAEIDNDTVAYHFHEPLGVVGQIIPWN
FPLLMATWKLAPALAAGNAVVLKPAEQTPASIHYLLSLVADLLPPGVVNVVNGFGVEAGRPLASSPRVAKVAFTGETTTG
RLIMQYASENIKPVTLELGGKSPNIFFDDVSAAPDDFRDKALEGFTMFALNQGEVCTCPSRALIQQGHYADFLAAAVART
REIKPGHPLDSATMVGAQASNDQLEKILSYLDIGRQEGARVLTGGARADLGGELSGGYYVEPTIFEGSNSMRIFQEEIFG
PVVSVTSFADLDDAVKIANDTLYGLGAGVWTRDINKAYRAGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRENHKMML
DHYQQTKNLLVSYGPKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-137 60
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-140 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-140 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-140 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-140 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strop_0957 YP_001157812.1 aldehyde dehydrogenase VFG0082 Protein 2e-137 60