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Name : Strop_4445 (Strop_4445) Accession : YP_001161251.1 Strain : Salinispora tropica CNB-440 Genome accession: NC_009380 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 5041088 - 5042884 bp Length : 1797 bp Strand : - Note : PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase DNA sequence : ATGGCGACAACGCGGCAGCAACACGCCGAAAGCGGCGAAGCACGAGCCCCCCGCGATGACTTCTTCGCACCTGTCCGCGG CAGCCTCGCGGGGATCGTGCTGCTCAGCGTGATCGGTGCGGCGACCGGAGTGGTCCCGTTCATCGCGATCGTTGAGCTTG CGCGTGCTCTCCTGCCGTCCCTGTCGACCGGCGAGGTGGACACCTCCCGGGTCTGGACCATTGTGGCCCTGGCGGTGGTG GCTCTGCTCGTCAGCTTCAGTACCGCGGTCGGGTCGGGCATGGTCAGCCACCTGGCCGACGCGGAGCTACAGCTTTCGCT GCGGCAGCGGATCATCCGTCACCTTCAGCGCCTGCCGCTGGGCTGGTTCGATACGCGTACCTCCGGAACGGTGCGCAAGA TGGTCGAGAACGACGTGATCGCGCTGCATCAACTCGTTGCGCACGGGATCCAGGACGTCGTCACCGCGATCACCGTGCCC GTCATCGGCATCGTCTATCTGTTCGTCGTGCAGTGGCAGTTGGCCCTGGTCGCGCTGGTGCCGGTTCTTCTCTCGATCGT GCTGTACGCGTTGATAATGCGGGGCGGCGCGGAGAAGTTCGCACAGTACGACGCGGCGACCGAACGCCTGTCCGGTGCCA CCGTGGAGTTCGTTCACGGCATCGCCGTGGTCAAGCGGTTTGGCCAGGTTGGTCGCAGTCACCGCCGCTACCACGACCAG ATGCGGCAGTACGTCGACTTCATTGGGCGATGGACCCGGGATACCGCGCCGTTGCAGGGCATCGCTGAGGTCGTCACCTC CCCGGTGGTCGTGCTGGTCCTCCTGCTTGCCGCCGGTGCCCACCTGGTGTCCAGTGGTGAGGCCGAGCCCATCGATGTGC TCCCCGGGCTGTTGTTGGGGCTTGGGCTGACCGGGCCGTTGATGAAACTCGCCTCCTCGGCGCAGTTCCTGCGCAACGCG GCAAAGGCGCATGAGTCCCTCGCGAGGTTCTTCGCCCTGCCGTCGGTACCCGAGGCCGGCTCGCCCGCCACGCCGGACGG CCATGACATCGGATTCGAGCGGGTCTCGTTCAGCTACGACGGCCGACACCAGGTGCTGCACGACATCGTCGCGGCCTGCG CGCCAGGTACCGTCACGGCGCTCGTCGGGGCCTCCGGTTCGGGTAAGTCCACGATGGCCAAACTGGTGCCGCGGTTCTAC GATGCGTCGGCGGGACAGGTCACGATCGGCGCGGCGGACGTCCGGCAGATCTCATCGGAGCAGCTGTACCGCGAGGTCGG GTTCGTGTTCCAGGACGTGCGGCTGTTGCGCACGAGCCTGCGCGACAATATCCGGCTCACGCGGCCCGACGCCACGGACG AGGACGTCGAGCGGGTGGCGCGCGCGGCGCAGATCCACGACCGAATCCTCCGCTTCGAGCGAGGGTATGACTCCGTCATT GGTGTCGATGCGAACCTCTCCGGTGGTGAGGCGCAACGGGTGACGATCGCTCGTGCGCTGCTCGCCGACGCCCCGATTCT GGTGCTCGACGAGGCCACCGCGTTTGCCGACCCGGACTCGGAGGCGGCGATCCAGGCTGCACTCGGCGAGCTCACCACCA ACCGCACCGTCCTGGTGGTCGCCCACCGCCTGCACACCATCGTCGGCGTCGATCAGATCCTCGTCCTCGACGCGGGGCGG ATCGTCGAGCGCGGTACGCACCCGCAACTCGTCGCCGCAGGCGGGCGCTACGCACGGATGTGGTCGCGCTACCAGGCGAA CCAAGCGACTGCCGTTCCGGAAGGAGTCAAGGGATGA Protein sequence : MATTRQQHAESGEARAPRDDFFAPVRGSLAGIVLLSVIGAATGVVPFIAIVELARALLPSLSTGEVDTSRVWTIVALAVV ALLVSFSTAVGSGMVSHLADAELQLSLRQRIIRHLQRLPLGWFDTRTSGTVRKMVENDVIALHQLVAHGIQDVVTAITVP VIGIVYLFVVQWQLALVALVPVLLSIVLYALIMRGGAEKFAQYDAATERLSGATVEFVHGIAVVKRFGQVGRSHRRYHDQ MRQYVDFIGRWTRDTAPLQGIAEVVTSPVVVLVLLLAAGAHLVSSGEAEPIDVLPGLLLGLGLTGPLMKLASSAQFLRNA AKAHESLARFFALPSVPEAGSPATPDGHDIGFERVSFSYDGRHQVLHDIVAACAPGTVTALVGASGSGKSTMAKLVPRFY DASAGQVTIGAADVRQISSEQLYREVGFVFQDVRLLRTSLRDNIRLTRPDATDEDVERVARAAQIHDRILRFERGYDSVI GVDANLSGGEAQRVTIARALLADAPILVLDEATAFADPDSEAAIQAALGELTTNRTVLVVAHRLHTIVGVDQILVLDAGR IVERGTHPQLVAAGGRYARMWSRYQANQATAVPEGVKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 2e-81 | 46 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 2e-81 | 46 |
