Gene Information

Name : Strop_4391 (Strop_4391)
Accession : YP_001161197.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 4968751 - 4969641 bp
Length : 891 bp
Strand : +
Note : PFAM: polysaccharide deacetylase

DNA sequence :
ATGCCGAAGGATATCCTGTGCGCGTTTGGTGTCGACATGGACGCGGTCGCCGGCTGGCTGGGATCGTACGGCGGCGAAAA
TTCGCCCGTCGATATCTCCCGTGGCATTTTCGCTGGTGAGGTCGGCACACCACGCCTCCTTAACCTGTTTGAAAGATATG
ATCTTCCGAGCACCTGGTTCGTGCCTGGACACTCCATCGAGACATTTCCCGAACAGTTCCGCCAGATCGTGGACGCCGGC
CACGAGGTAGGCCTCCACGGTTACAGCCATGAAAACCCGATCGCGATGAGTCATACGCAGGAGGCCGCCGTCCTGGACCG
GTGCATCGACCTGATCGAGTCGGTAGTCAAACAACGCCCCAGGGGCTACGCCGCGCCGTGGTGGGAGTTCTCGCCGGTCA
CGCACAAGCTACTACTCGAGCGGGGCATCCGGTACGACCACTCGCTGATGCACGACGACTTCACCGTCTACCGGGTCCGT
GTGGGTGAGACCTGGACCAAAGTCGATTATTCCGCGGATGCCGAGGACTGGATGAAGCCGTTGGTCCGCGGCGAGGAGAC
CGATCTCATCGAGATTCCGGCGAACTGGTATCTCGATGACCTGCCACCAATGATGTACATCAAGGCCAGCCCGAACAGCC
ATGGCTACGTCAACCCGCGACAGCTCGAGGAGATGTGGCGTGACCAATTCGACTGGGTCTACCGGGAGCTGGACTACGCC
GCATTCACTTTCACCATCCATCCAGACGTGTCGGGACGCCCGCAGGCGCTTCTGATGCTCGAGCGAATGATCGAGCACAT
CAACCAGCATGAAGGCATCAGGTGGGCCACCTTCGACGACATCGCCACCGATTTCGCACGTCGCTACCCACGCACTGGAG
ACAGCGATTGA

Protein sequence :
MPKDILCAFGVDMDAVAGWLGSYGGENSPVDISRGIFAGEVGTPRLLNLFERYDLPSTWFVPGHSIETFPEQFRQIVDAG
HEVGLHGYSHENPIAMSHTQEAAVLDRCIDLIESVVKQRPRGYAAPWWEFSPVTHKLLLERGIRYDHSLMHDDFTVYRVR
VGETWTKVDYSADAEDWMKPLVRGEETDLIEIPANWYLDDLPPMMYIKASPNSHGYVNPRQLEEMWRDQFDWVYRELDYA
AFTFTIHPDVSGRPQALLMLERMIEHINQHEGIRWATFDDIATDFARRYPRTGDSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 1e-107 71