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Name : Strop_4277 (Strop_4277) Accession : YP_001161083.1 Strain : Salinispora tropica CNB-440 Genome accession: NC_009380 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 4845769 - 4847277 bp Length : 1509 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type DNA sequence : GTGACCGAGCAGAACGCCGTACCAGTTGACCCCGCCGACGACCTTCCGGAGCAGATGAAGGTCCGCCGGGAGAAGCGGGA CCGGATGCTCGCCGAGGGGATCGAACCCTATCCGCTTGGGTATCCGCGGACCCGCACGATCGCCGAGATCCGCCAGGGGT ACGCCGACCTGCCCACTGACACGGCCACCGGTGACCAGGTGTCGGTCACCGGGCGGGTGATCTTTATGCGGAACACCGGC AAGCTCTGCTTCGCCACGCTGCGGGACGGCGACGGCACCGAGCTGCAGGCGATGCTCTCCCTGGACCGGGTCGGCGCGCA GCGGCTTGAGGACTGGAAGCGGCTGGTGGACCTCGGTGACCTCGTCGGGGTAACCGGTGAGGTGATCACCAGCCGGCGTG GGGAGCTGTCGGTGCTGGCGCAGGGGTGGGCGGTCACCGCGAAGGCCCTTCGTCCGCTGCCGGTGGCGCACAAGCCGCTC AGTGAGGAGGCCCGGGTCCGGCAGCGCTACGTCGACCTCATCGTTCGCCCGCAGGCCCGGCAGATGGTTCGTACCCGGGC GACCGCGGTTCGTAGCCTGCGGGAGTCCCTGCACGAGCGGGGCTTCCTCGAGGTGGAGACCCCGATGCTGCAGCTGCTGC ACGGCGGTGCGACCGCTCGCCCATTCGTGACTCACAGCAATGCGCTCAGCACCGATCTGTATCTACGAATCGCTCCGGAA CTATTTCTCAAGCGCGCGCTCGTTGGTGGCGTAGACCACGTCTTCGAGATCAACCGTAACTTCCGCAATGAGGGCGTTGA CTCATCGCACTCGCCGGAGTTCGCGATGCTCGAGGCTTACCAGGCGTATGGCGACTACGACACGATCGGCGAGTTGACCC GTCATCTCATCCAGCAGGCGGCGCTCGCGGTCGGCGGCTCGACGGTGGTGACCCACGCGGACGGTCGTGAGTTCGACCTC GGCGGTGAGTGGCGTTCGGTGACGCTGTTCGGTGCCCTTTCCGAAGCGCTCGGAGAGGAGGTCACGGTACGCACGGAGCG GACCCGTCTGGTCGAGTACGCGGACAAGGTGGACTTGGCGGTCGACCCGAAGTGGGGTCCGGGCAAGCTGGCCGAGGAAC TGTTCGAGGAGTTGGTCGTCCCGGGTCTGCTGGCGCCCACCTTCGTGCGGGACTATCCCGAGGAGACCAGCCCGTTGGTC CGGGCGCACCGCACCGAGCCGGGCCTGACCGAGAAGTGGGACCTCTACGTACTCGGCTTCGAACTGGGTACGGGCTACTC CGAGTTGGTGGATCCGGTGGTTCAGCGGGAGCGTCTGGTGGCCCAGGCGCGGCTCGCGGCGCGGGGCGACGACGAGGCGA TGCGGCTCGACGAGGACTTTCTCCGGGCCCTGGAGTACGGAATGCCACCGTCTGGTGGTATGGGAATGGGAATCGACCGG CTGCTCATGGCGCTGACCGGCCTGGGAATTCGGGAAACCATCCTCTTCCCGCTGGTCCGACCCGAGTGA Protein sequence : MTEQNAVPVDPADDLPEQMKVRREKRDRMLAEGIEPYPLGYPRTRTIAEIRQGYADLPTDTATGDQVSVTGRVIFMRNTG KLCFATLRDGDGTELQAMLSLDRVGAQRLEDWKRLVDLGDLVGVTGEVITSRRGELSVLAQGWAVTAKALRPLPVAHKPL SEEARVRQRYVDLIVRPQARQMVRTRATAVRSLRESLHERGFLEVETPMLQLLHGGATARPFVTHSNALSTDLYLRIAPE LFLKRALVGGVDHVFEINRNFRNEGVDSSHSPEFAMLEAYQAYGDYDTIGELTRHLIQQAALAVGGSTVVTHADGREFDL GGEWRSVTLFGALSEALGEEVTVRTERTRLVEYADKVDLAVDPKWGPGKLAEELFEELVVPGLLAPTFVRDYPEETSPLV RAHRTEPGLTEKWDLYVLGFELGTGYSELVDPVVQRERLVAQARLAARGDDEAMRLDEDFLRALEYGMPPSGGMGMGIDR LLMALTGLGIRETILFPLVRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-141 | 58 |
