Gene Information

Name : Strop_0397 (Strop_0397)
Accession : YP_001157260.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 457349 - 458248 bp
Length : 900 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGATCATGGTCGAACACCTCACCAAGCGGTACGGCCCGCACACAGTCGTCGACAACATCTCGTTCCACTGCGAGCCCGG
CACTGTTACCGGCTTCCTCGGGCCGAACGGTGCCGGCAAGTCCACCACCATGCGGATGATCTGCGGTCTGACCCCGCCGA
CCGACGGCAGCGCAACGGTCGCCGGCCGGCCGTACCGGCAGCTACCCAATCCGGGGCGGGAGATCGGGGTGCTGCTCGAC
GCCTCGGCCCAACACTCGGGGCGCACCGGGCGGGAGACGCTGACCCTGGCCGCCACGACGATGGGTGTGGACCGTAGTCG
GGTCGCCGAGGTGCTGGACCTGGTCGGATTGAACGCGGTCGCCGCCAGGCGGCGGGTCGGTGCATATTCATTGGGGATGC
GGCAGCGGCTCGGCCTAGCGCTGGCGCTGCTCGGTGACCCCCGGGTGCTGATCCTCGACGAGCCGGCCAACGGCTTGGAC
CCAGAGGGCATCTACTGGATGCGCGGCCTGCTGCGCGACTTCGCCGACCGGGGTGGCACCGTGCTGCTGTCGTCGCACCT
GCTGCGCGAGGTGGAGGCGGTCGCCGACCGGCTGCTGGTGGTCGGCGGCGGCCGGATTGTTGCCCAGGGCGGCAGGGACG
AGCTGCTCGCCGACACGGGCACCCTGGTCCGGGCACGGGACTCGCTTGCCCTGCGGCTCACTCTGCAGCGGGCTGCACTG
GACGCCACCGCCGACACCAATGGCGGCTTCGTCGTGCACGCCGATCCGGGCGTGGTGGGCCAGGCCGCCGCCGACGCCGG
GGTGGTCCTCACCGAGCTGCGGCCCGCCGCCGGGGGCGGCCTCGAACAGCTCTTCCTCACCCTCACCGCGGGCGCGACCA
CGAAGGAGGCCGTCAAGTGA

Protein sequence :
MIMVEHLTKRYGPHTVVDNISFHCEPGTVTGFLGPNGAGKSTTMRMICGLTPPTDGSATVAGRPYRQLPNPGREIGVLLD
ASAQHSGRTGRETLTLAATTMGVDRSRVAEVLDLVGLNAVAARRRVGAYSLGMRQRLGLALALLGDPRVLILDEPANGLD
PEGIYWMRGLLRDFADRGGTVLLSSHLLREVEAVADRLLVVGGGRIVAQGGRDELLADTGTLVRARDSLALRLTLQRAAL
DATADTNGGFVVHADPGVVGQAAADAGVVLTELRPAAGGGLEQLFLTLTAGATTKEAVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 1e-33 44
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 1e-33 44
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 3e-40 42
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 2e-36 42