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Name : Strop_3938 (Strop_3938) Accession : YP_001160746.1 Strain : Salinispora tropica CNB-440 Genome accession: NC_009380 Putative virulence/resistance : Unknown Product : transcription termination/antitermination factor NusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 4492011 - 4492739 bp Length : 729 bp Strand : - Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein DNA sequence : GTGCCTGAGTACGACGAGACCGCCGAGCCCGTGGACGAGCAGTCCACGGTTGCGACCGCGGCTGGTGACATGTCGGTTGA GGCCGCCAGCGAGCCGGAGCTCTCCGACAGCGCCAGCGAGCCGGCCGAGGAGCCCGAGTTCGACCCGGTTGCCGAGCTGC GCCAGAAGCTGCGCTACGCCCCGGGCGACTGGTATGTGGTGCACTCGTACGCCGGCTACGAGAACAAGGTCAAGACCAAC CTCGAGACCCGGATCACCTCCCTCGACATGGAGGACTACATCTACCAGGTCGAGGTGCCGACCCGGGACGAGGTCGAGGT CAAGAACGGCAAGCGTTCCCAGGTTCAGGCCAAGGTCTTCCCCGGCTACATCCTGGTTCGAATGGAGCTCACCGCCGAGT CGTACTCCTGCGTGCGGAACACGCCAGGCGTGACCGGCTTCGTGGGCGCCACCGACCGGGCCGACCGTCCTGCGCCGCTC AGCCTTGACGAGGTGTTGAAGTGGCTGGCGCCAGCAGTCGAGGCGGTGGAGAAGAAGGCGAAGCCCGAGGTCAAGGTCCT CGACTTTGAGGTTGGCGACTCGGTTACCGTCACCGACGGCGCCTTCGCCTCGCTGCCGGCGACGATCAGCGAGATCAATG CTGACCAGCAGAAGCTCAAGGTGCTGGTGTCGATCTTCGGTCGAGAGACACCGGTGGAGCTGAACTTCAACCAGGTCGCC AAGATCTGA Protein sequence : MPEYDETAEPVDEQSTVATAAGDMSVEAASEPELSDSASEPAEEPEFDPVAELRQKLRYAPGDWYVVHSYAGYENKVKTN LETRITSLDMEDYIYQVEVPTRDEVEVKNGKRSQVQAKVFPGYILVRMELTAESYSCVRNTPGVTGFVGATDRADRPAPL SLDEVLKWLAPAVEAVEKKAKPEVKVLDFEVGDSVTVTDGAFASLPATISEINADQQKLKVLVSIFGRETPVELNFNQVA KI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 3e-27 | 41 |
