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Name : Strop_3883 (Strop_3883) Accession : YP_001160691.1 Strain : Salinispora tropica CNB-440 Genome accession: NC_009380 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4446309 - 4447901 bp Length : 1593 bp Strand : - Note : PFAM: thiamine biosynthesis protein ThiC DNA sequence : ATGCAGAAACGTCGCAAGGTCTACGTCGAGGGGTCGCGGCCGGATATTCAGGTGCCGTTCGCCGAGGTCGACCTGACCGG AGACAATCCGCCGGTGCGGCTCTACGACACTTCGGGGCCGGGATCCGAACCGGAGGTGGGGCTGCCGCCGATGCGCGGCA AGTGGATCGCGTCTCGTGGGGACGTCGCCCCGGTGCGGGGCGCCGGTACGCCGCTGGCGGGAGTGGACGGTCAGCGGCCG ACCCAGCTGGCGTACGCCCGGTCGGGTGTGGTGACGCCGGAGATGGAGTTCGTGGCGATCCGCGAGGGGGTCGCGCCGGA GCTGGTGCGGGAGGAGATCGCGACCGGCCGGGCCGTGCTGCCGCTGAACGTCAACCACCCGGAGTGCGAGCCGGCGATTA TCGGCAAGGCGTTCCTGGTAAAGATCAATGCGAACATCGGTACCTCGGCGGTCACCTCCTCGGTCGCCGAGGAGGTGGAG AAGCTGACCTGGGCGACCCGGTGGGGCGCGGACGCCGTGATGGACCTGTCGACCGGCAAGCGGATCCACGAAACCCGCGA GGCGGTCGTACGGAACTCCCCGGTGCCGATCGGCACCGTGCCGATCTACCAGGCGTTGGAAAAGGTGGGCGGCGATCCGG CGAAGTTGAGCTGGGAGGTGTTCCGGGAGACGGTCATCGAGCAGGCCGAGCAGGGCGTCGACTACATGACGGTGCACGCC GGAGTGCTGCTGTCGTACGTGCCGCTCGCCGTGGAGCGGGTGACCGGGATCGTCTCCCGTGGTGGTTCGATCATGGCAGC ATGGTGCCTGGCCCACCACGAGGAGAACTTCCTCTACACGAACTTCCGGGAGCTCTGCGAGATCCTGGCCCGCTACGACG TGACGTTCTCGCTCGGCGACGGGCTGCGCCCCGGCTCCATCGCGGACGCCAACGACGAGGCGCAGTTCGCCGAACTGAGG ACCCTCGGTGAGCTGACGAAGGTCGCCTGGGAGCACGATGTCCAGGTGATGATCGAGGGCCCGGGGCACGTACCAATGCA CAAGATCAAGGAGAATGTGGACCTTCAGCAGGAGTGGTGTCACGAGGCGCCGTTCTACACGCTCGGCCCACTGAGTACGG ACATCGCGCCGGCGTACGACCACATTACGTCCGCCATCGGCGCGGCGATGATCGGAATGTTCGGTACGGCGATGCTCTGC TATGTCACCCCGAAGGAGCACCTCGGGCTGCCGGACCGGGACGACGTGAAGGCCGGCGTGATCGCGTACAAGATCGCTGC GCATGCCGCGGACCTGGCCAAGGGGCACCCGGGGGCCCAGGCGTGGGACGACGCGCTCTCCAAGGCACGATTCGAGTTCC GCTGGGAGGACCAGTTCAACCTCGCGTTGGACCCGGAGACCGCGCGCGCCTACCACGACGCCACCCTGCCCGCCGAACCG GCGAAGACGGCCCACTTCTGTTCGATGTGCGGCCCGAAGTTCTGCTCCATGAAAATCACCCAGGAGCTAAAGGAGTACGC GGCGCGTGGCATGAAGGACAAGTCAGAGGAGTTCGTAGCCTCCGGCGGTCGCGTCTACCTTCCGCTGGCCTGA Protein sequence : MQKRRKVYVEGSRPDIQVPFAEVDLTGDNPPVRLYDTSGPGSEPEVGLPPMRGKWIASRGDVAPVRGAGTPLAGVDGQRP TQLAYARSGVVTPEMEFVAIREGVAPELVREEIATGRAVLPLNVNHPECEPAIIGKAFLVKINANIGTSAVTSSVAEEVE KLTWATRWGADAVMDLSTGKRIHETREAVVRNSPVPIGTVPIYQALEKVGGDPAKLSWEVFRETVIEQAEQGVDYMTVHA GVLLSYVPLAVERVTGIVSRGGSIMAAWCLAHHEENFLYTNFRELCEILARYDVTFSLGDGLRPGSIADANDEAQFAELR TLGELTKVAWEHDVQVMIEGPGHVPMHKIKENVDLQQEWCHEAPFYTLGPLSTDIAPAYDHITSAIGAAMIGMFGTAMLC YVTPKEHLGLPDRDDVKAGVIAYKIAAHAADLAKGHPGAQAWDDALSKARFEFRWEDQFNLALDPETARAYHDATLPAEP AKTAHFCSMCGPKFCSMKITQELKEYAARGMKDKSEEFVASGGRVYLPLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 4e-179 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 4e-179 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-165 | 60 |
