Gene Information

Name : Strop_3824 (Strop_3824)
Accession : YP_001160633.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4381347 - 4382033 bp
Length : 687 bp
Strand : -
Note : PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; Sigma-70, region 4 type 2

DNA sequence :
ATGACGGACCAGACGGCGGGCGCAGCGGCGGACGCGGGTGCTGCCACGCGGCGGCTGCGGGTCTTTCTTGTTGACGATCA
CGCGATGTTTCGGGCCGGAGTCCGCGCCGAGCTGGGTGCGCATGTCGACGTGGTGGGCGAGGCGAGCACGGTGGGGGAGG
CGGTCAGCCGGATCGCCGCGACCGAACCCGACGTGGTGCTGCTCGACGTGCACATGCCGGAGGGGGGTGGCCGGGCGGTG
CTCGAGGCCATCCGGCGCACGTACCCGCACGTGCGGTTCCTCGCGCTCAGTGTCTCGGACGCGGCCGAGGACGTGATCGG
GCTGATCCGCGCTGGCGCCCGTGGCTATGTCACCAAGACGATCTCCCCGGACGAGTTGGCGGCGGCGGTCCGACGGGTCG
CCGAGGGCGATGCCGTCTTCAGCCCCCGGCTGGCCGGTTTCGTGTTGGACGCCTTCGCCGCCCGCCCGGACGCGCCGGTC
TCCGACCCCGAGCTGGACCAGCTGACCAACCGGGAACGGGAGGTGTTGCGTCTGCTCGCTCGGGGGTACGCGTACAAGGA
GATCGCCAAGGAGCTGTACATCTCGATCAAGACGGTCGAGACGCACGTGTCGAACGTGCTCCGCAAGCTCCAGATGTCCA
GCCGCTACGAGTTGTCACGCTGGGCGGCGGATCGTCGGCTTGTCTGA

Protein sequence :
MTDQTAGAAADAGAATRRLRVFLVDDHAMFRAGVRAELGAHVDVVGEASTVGEAVSRIAATEPDVVLLDVHMPEGGGRAV
LEAIRRTYPHVRFLALSVSDAAEDVIGLIRAGARGYVTKTISPDELAAAVRRVAEGDAVFSPRLAGFVLDAFAARPDAPV
SDPELDQLTNREREVLRLLARGYAYKEIAKELYISIKTVETHVSNVLRKLQMSSRYELSRWAADRRLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0600 NP_938974.1 two component system response regulator Not tested Not named Protein 2e-61 64