Gene Information

Name : Strop_3822 (Strop_3822)
Accession : YP_001160631.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0601
EC number : -
Position : 4378364 - 4379374 bp
Length : 1011 bp
Strand : -
Note : PFAM: binding-protein-dependent transport systems inner membrane component

DNA sequence :
ATGGGGCGCTACGTCATTCGACGGTTGCTCCAGTTCATCCCGACCGTGCTGGGCACCATGTTCCTGCTCCACTACATGAC
CTCGCTGGCGATTCAGTTCAGCGGGAACCCGGTCCGAGCCATCTTCGGTGACCGGACCCCGCCGCCGGCCCTACTCCAGG
CGGTCACCGACCGACTCGGCTACGGTGACCCCTGCCTCGAGCAGAAGGGCAACCCCTGCTTCGGGCTCTTCCTCGACCGG
GTGAGCGGAGTCTTCCTGCACTTCGACTTCGGCATCGACCTGCGGCGGCAGGAGGTCACCGACCTGGTGGCCAATGCCGT
TCCATTCACCCTGAAGCTGCTGGTGATCGCGATTGTCTTCGAGGCCGTCGTCGGTATCGCCGCCGGTGTGTGGGCGGGTC
TGCGGGGCGGCAGCTTCGCGGACAACCTTGTCAAGATCAGCACCGTCTTCGTGATCTCTGTGCCGATCTTCGTGCTCGGT
ATCGTGGTGCGGGAGTTCATCGGGGTCAAGTTCGGCAACATCCTGCGTGATCAGGAGTGGATCCCCGACGTCGTCGCGTA
CGGGTTCTTCAGCCCCGGCTTCAAGCCGGACTACCCGTTCGCCAGTCTCCTGATCCCCGGCATGGTGCTCGGCGCGGTGG
CGCTCGCCACCACCGCGCGTCTGACCCGGACCAGCATCATGGAGAACATCCGGGCGGACTACGTCCGGACCGCACGGGCG
AAGGGCCTGGCGAACAAGCGGGTCATCGGCGTGCACACGCTGCGTAACTCGCTGATTCCGGTGATCACGTACCTCGGCGT
CGACATCGGTTCGGCGATGGCGGGCGCGGTGGTCACCGAGACCATCTTCAACGTGCCCGGTATCGGCCGACTGGTGACGA
GTGCCGCCCGGGATGGAGAGTCGTCCGTGGTCATCGGCGTGGTGACCATGCTGGTGTTGGTCGTTCTGCTCGCCAACCTG
TTGGTCGACCTCCTGTACGCCGTCCTCGACCCGAGGATCCGCTATGAGTGA

Protein sequence :
MGRYVIRRLLQFIPTVLGTMFLLHYMTSLAIQFSGNPVRAIFGDRTPPPALLQAVTDRLGYGDPCLEQKGNPCFGLFLDR
VSGVFLHFDFGIDLRRQEVTDLVANAVPFTLKLLVIAIVFEAVVGIAAGVWAGLRGGSFADNLVKISTVFVISVPIFVLG
IVVREFIGVKFGNILRDQEWIPDVVAYGFFSPGFKPDYPFASLLIPGMVLGAVALATTARLTRTSIMENIRADYVRTARA
KGLANKRVIGVHTLRNSLIPVITYLGVDIGSAMAGAVVTETIFNVPGIGRLVTSAARDGESSVVIGVVTMLVLVVLLANL
LVDLLYAVLDPRIRYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0923 YP_005160015.1 putative peptide transport system membrane protein Not tested Not named Protein 5e-29 44