Gene Information

Name : Strop_3797 (Strop_3797)
Accession : YP_001160606.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport systems inner membrane component
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0601
EC number : -
Position : 4352418 - 4353356 bp
Length : 939 bp
Strand : +
Note : PFAM: binding-protein-dependent transport systems inner membrane component

DNA sequence :
ATGGTCCGTTTCATTCTGCGACGACTGCTCCAGATGGTCCTCGCCTTCTTCGGGACCACGCTGATCGTCTACGCGCTGAT
GTTCGCCGGTCAGGGTGATCCCATCCAGGCTCTCGCCGGCGAACGCCCGGTCACCGATGCCCAGCGGGCCTACCTGACGG
AGAAGTTCCACCTGGACCGGACCGGCATCGACGGCTTCTTCTACCGCTACTTCGACTACATCCGGAACCTTCTCCAGGGC
GACCTCGGCGAATCCCTCACCGGACGGCAGATCGGCGACATCCTGGCCGCCGCCTGGCCGGTGACGATCAAGCTGGCACT
GATCGCGATGACAGTCACCGTGCTCATCGGGGTCACCGCCGGCGTGCTCGCCGGCATTCGACGGGCCAGTATCTTCGACA
ACTCGACGCTGCTGCTGACCCTGGTCGTGCTCGCCGTACCGACCATCGTGCTGGCGCCCATCGCGCAGTACCTCTTCGGC
GTCCGGTGGCAGCTCTTCCCGCCCACCGCCGGCGCCGACCCCGACTTCTACGCGCTCCTGCTGCCCGGGATCGTCCTCGG
CTCCCTCTCCCTGGCCACCGCGCTGCGGCTGACCCGGACCTCGGTGGCCGAAAACCTCCGCGCCGACTACGTCCGTACCG
CCCGGTCGAAGGGCCTGGTCAAGCGACGGATCGTCGGCATCCACGTACTACGCAACTCACTCATCCCGGTGGTTACCTTC
CTCGGCGTCGAGTTGGGCAACCTGATGGGCGGCGCGATCATCACCGAAGGGGTGTTCAACATCCCCGGGGTCGGTTTCAA
CCTCTTCCGCGCCATCCGCACCGAGGACGGTCCGTTGGTGGTGGGGATCGTCAGCGTGCTGGTCGTCGTCTACCTCGTCG
CCAACCTGGTGGTGGACGTGCTCTACGCCGTACTCGACCCGAGGATCCGCTATGAGTGA

Protein sequence :
MVRFILRRLLQMVLAFFGTTLIVYALMFAGQGDPIQALAGERPVTDAQRAYLTEKFHLDRTGIDGFFYRYFDYIRNLLQG
DLGESLTGRQIGDILAAAWPVTIKLALIAMTVTVLIGVTAGVLAGIRRASIFDNSTLLLTLVVLAVPTIVLAPIAQYLFG
VRWQLFPPTAGADPDFYALLLPGIVLGSLSLATALRLTRTSVAENLRADYVRTARSKGLVKRRIVGIHVLRNSLIPVVTF
LGVELGNLMGGAIITEGVFNIPGVGFNLFRAIRTEDGPLVVGIVSVLVVVYLVANLVVDVLYAVLDPRIRYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0923 YP_005160015.1 putative peptide transport system membrane protein Not tested Not named Protein 3e-51 51