Gene Information

Name : Strop_0368 (Strop_0368)
Accession : YP_001157231.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 423138 - 423716 bp
Length : 579 bp
Strand : +
Note : PFAM: Integrase, catalytic region

DNA sequence :
TTGCACGCGGCGCGGTCCGCACCGGGACCGTTGCGGCATCCGAACCGTTATGGGGCGGACAAAGGGCCGGGTCGTCACCC
AAGGCTCTCGACTACCGCAGCGGCGACAACGAGCGGGCACTGGGAGGGCGACCTCATCATCGGCAAGGCCCACACGTCAG
CGATCGGCACGCTCGTCGAACGCACCACCCGCTTCGTCGCTTTGGTCCACCTGCCCAACGGCCGCCAGCCCGCCCAGGTC
CGTGACGCTCTCGTCCAGACTGTCTCGAGCCTGCCGGCCCAGCTCAAAAGCTCCCTGACCTGGGATCAGGGATCCGAAGT
GGCCCTGCACACACAGTTTAGCACCGCCACCGACATGCCCGTCTTCTTCTGCGATCCCGGCAAGCCCTGGCAGCGCGGGT
CGAACGAGAACACCAACGGTCTGCTACGCCAGTACCTCCCCAAGGGCACCGACCTGACCCGCTACAGCCGCGGGGACCTG
GACGCCGTGGCCGCCGAGCTAAACAGCCGATCACGCAAAACGCTCGGCTGGGACACCCCAGCCGAACGCCTCGCTAAATT
CCTGGCAACAGCCAATTGA

Protein sequence :
MHAARSAPGPLRHPNRYGADKGPGRHPRLSTTAAATTSGHWEGDLIIGKAHTSAIGTLVERTTRFVALVHLPNGRQPAQV
RDALVQTVSSLPAQLKSSLTWDQGSEVALHTQFSTATDMPVFFCDPGKPWQRGSNENTNGLLRQYLPKGTDLTRYSRGDL
DAVAAELNSRSRKTLGWDTPAERLAKFLATAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB5 ABD94692.1 putative IS30 family transposase Not tested ExoU island B Protein 5e-37 53
CDCE8392_1981 YP_005134512.1 transposase-like protein Not tested Not named Protein 8e-31 50