Gene Information

Name : Strop_3688 (Strop_3688)
Accession : YP_001160497.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4228804 - 4229739 bp
Length : 936 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGACAGACGGACGGTCGAGCCCCGACACCACAGGCGAGATCGTGGTCTCCCGGCTGACGAAGATTTACGGCAGCGCTCC
CGCGGTCGACGACCTGTCGTTCCGGGTGGAGCCGGGTCGGGTCACCGGATTCCTGGGCCCGAACGGCGCCGGCAAGACCA
CCACGCTGCGCATGCTGCTGAACCTGGTCACCCCGACGGCTGGCCAGGCGACCATCGGCGGGCGGCGGTATGCCAACCTG
ACCGACCCGGTGCGGCATGTCGGCGCGGTGCTGGAGGCGTCCAGCGCACACAAGGGGCGCACCGGCATCAACCACCTGCG
GGTGATCTGCACCGCAGCCGGGCTGCCCCGTTCCCGCGCCGACGAGGTGCTGGCCCAGGTCGGTCTGGCACCAGCGGCCC
GGCGCAAGTTCAAGGGCTACTCGTTGGGGATGAAGCAGCGCCTGGGCATCGCCGCGGCGATGCTCGGCGACCCCCGGGTG
CTGATCCTGGACGAGCCGGCCAACGGGCTCGACCCGGAGGGCATTCGGTGGATGCGTGGCTTCCTGAAGAGCCTGGCCGC
CGAAGGGCGTACGGTCCTGGTCTCCAGTCACCTGCTGTCGGAGATGCAGCTGCTCGCGGACGATGTCGTCATCATCGCGG
CCGGCCGGCTGATCCGGCAGGGCCCGGTGGACCAGGTCATCGGCTCGATGGCGCAGACCGCCCGGGTCCGGGTGCGCTCC
CCGCAGGCCGAGACGCTGCGGGCCGCACTCGAGCGGGAGTCGGCGACCGTGGACGTTGACGACCAGGGGGCCCTGCTGGT
CGGGGGCGTGGACGCACCGACGGTCGGCCGGGTGGCCCTGGCCGCCAGCGTGGAGCTGCATGAACTGGCCACCGAACGTC
CTGACCTTGAGGGCGTCTTCCTCGAGCTTACGGCCGGAAAGGCGGGCATCCGATGA

Protein sequence :
MTDGRSSPDTTGEIVVSRLTKIYGSAPAVDDLSFRVEPGRVTGFLGPNGAGKTTTLRMLLNLVTPTAGQATIGGRRYANL
TDPVRHVGAVLEASSAHKGRTGINHLRVICTAAGLPRSRADEVLAQVGLAPAARRKFKGYSLGMKQRLGIAAAMLGDPRV
LILDEPANGLDPEGIRWMRGFLKSLAAEGRTVLVSSHLLSEMQLLADDVVIIAAGRLIRQGPVDQVIGSMAQTARVRVRS
PQAETLRAALERESATVDVDDQGALLVGGVDAPTVGRVALAASVELHELATERPDLEGVFLELTAGKAGIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-49 47
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 4e-44 44
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 4e-44 44