Gene Information

Name : Strop_3662 (Strop_3662)
Accession : YP_001160471.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 4200363 - 4201499 bp
Length : 1137 bp
Strand : +
Note : PFAM: polysaccharide deacetylase

DNA sequence :
GTGGGGTGGGATCGAGCCAAAATCGCACCGCACGGGGACACTCCGGGAAGAATCAGGTCAAGAAACCTGGCGGCCAGGGG
GTGGCGGACGGAAGGGCGGGAACGTCAGAACTCGCCGGATTCCATTTCCCGCGGCCTCTTTGCGGGTGAGGTCGCCGTAC
CGCGCATGCTGAAGCTATTCCGAAGGTACGGCCTACGGAGCACCTGGTTCGTACCCGGGCATTCCATCGAGACCTTCCCC
GACCAGTGCCGACAGATCGTGGACGCCGGCCACGAGATGAGCATCCACGGCTACAGTCACGAGAACCCGCTGGCGATGAG
CCGTACGCAGGAGGCTGCGGTCCTGGACCGAAGCATCGAGTTGGTCGAGGCCGTGAGTAAGCGGCAGCCCACGGGATACG
CCGCACCATGGGGATCACTCTCACCGGTCACGCATGAGCTGTTGCTGGAACGAGGAATCAAGTACGACCGCACGTTCATG
CACAACGACTTCCATCCCTACCGACTTCGCGCCGGGGACACCTGGACCAAGATCGACTATTCCGCCCGAGCCAGCGAGTG
GATGAAGCCGCTGGTCCGCGGCGAGGAGACCGATCTCATCGAGATCCCACCAAACTGGTATCTCGATGACCTACCGCCGA
TGATGTTCATCAAGGCCAACCCCAACAGTCATGGCTGGGTCAACCCACGACAACTGGAAAAGATGTGGCGCGACCAGTTC
GACTGGGTCTACCGGGAGCTGGACCATGCCGTATTCCCCATCAATCTCCACCCCGATTTCTCGGGACATCCGCAGGTCCT
TCTGATGCTCGAACGAATTATCGACTACATCAAACAGCACAAGAGCATCCGGTGGGTCACCTTCGATGAGATTGCCAATG
ATTTCGCGGCCCGCAACCCCGCGGCGGGAGCAGGTGACCGCCCGCGGCGGACAGAACGTGGTACGGCACCCGGGAGGCTC
AGCCGGCGGCCCGCCGGGCACGGGCCCGACGCTTCCCCTCCTGCATCGCCTGCACCCGGGCCACCGGGATGGTGCGCCCC
TCGGCGACCAGGTCGGCCGGGAGCTGTTGCGCCGTGGGCATTCCGTCCGCCCACGGATCCCCGGTGGCGACCAGGGCGGG
CGCGGTCTGAATCGTGA

Protein sequence :
MGWDRAKIAPHGDTPGRIRSRNLAARGWRTEGRERQNSPDSISRGLFAGEVAVPRMLKLFRRYGLRSTWFVPGHSIETFP
DQCRQIVDAGHEMSIHGYSHENPLAMSRTQEAAVLDRSIELVEAVSKRQPTGYAAPWGSLSPVTHELLLERGIKYDRTFM
HNDFHPYRLRAGDTWTKIDYSARASEWMKPLVRGEETDLIEIPPNWYLDDLPPMMFIKANPNSHGWVNPRQLEKMWRDQF
DWVYRELDHAVFPINLHPDFSGHPQVLLMLERIIDYIKQHKSIRWVTFDEIANDFAARNPAAGAGDRPRRTERGTAPGRL
SRRPAGHGPDASPPASPAPGPPGWCAPRRPGRPGAVAPWAFRPPTDPRWRPGRARSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 1e-87 65