Gene Information

Name : Strop_3332 (Strop_3332)
Accession : YP_001160144.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 3823496 - 3824920 bp
Length : 1425 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp

DNA sequence :
GTGTTCGCCAATCCCGAGGAACTCCTGCGTTACCTCAAGAACGAGGACGTGAAGTTCGTCGACGTACGTTTCTGTGATCT
GCCCGGCGTGATGCAGCACTTCAACCTGCCCGCCGAGTCGATTGACGACGAGCTTCTCACCGACGGCCTCGCATTCGACG
GGTCGTCCATCCGCGGCTTCCAGGCGATCCACGAGTCGGACATGCTCCTGCTCCCGGACGTCGCCACCGCGTTCATCGAC
CCCTTCCGCGCGCAGAAGACTCTCGCGCTCAACTTCTTCATCCACGACCCGTTCACCCGCGAGGCCTACTCCCGCGACCC
CCGGAACGTGGCGAAGAAGGCCGAGGCGTACCTGGCGGCCAGCGGCATCGCCGACACCGCCTACTTCGGCGCGGAGGCCG
AGTTCTACATCTTCGACTCGATCCGCCACGAGACCTCGGCGCACCAGTCGTACTACTACATCGACTCGATCGAAGGCTGG
TGGAACACCGGCCGCGACGAGGAGGGTGGCAACCGCGGCTACAAGACCGCGTACAAGGGCGGCTACTTCCCGGTGCCGCC
GGTTGACCACTACGCCGACCTGCGCGACAAGATCGTCCGTCGGATGATCGACGCCGGCTACACCGTGGAGCGCTCGCACC
ACGAGGTCGGCACGGCCGGCCAGGCTGAGATCAACTACAAGTTCTCGACTCTGCTGCACGCCGCGGACCAGCTCCAGCTC
TTCAAGTACATCGTGAAGAACGAGACCTGGGTCAACGGCAAGACCGCCACCTTCATGCCGAAGCCGCTGTTCGGTGACAA
CGGCTCGGGCATGCACACCCACCAGAGCCTGTGGTTGAACGGTGAACCGCTCTTCTACGACGAGACCGGCTACGCCGGCC
TCTCCGACACCGCGCGCTGGTATATCGGCGGTCTGCTGCAGCACGCGCCGTCGCTGCTGGCCTTCACCAACCCGACGGTG
AACTCGTACCGGCGGCTGGTGCCGGGCTTCGAGGCACCGGTCAACCTGGTCTACTCGCAGCGCAACCGCTCCGCCTGCAC
CCGCATCCCGGTCACCGGGAGCAACCCGAAGGCCAAGCGGGTCGAGTTCCGCGTGCCGGACCCGTCGGCCAACGTCTACC
TGGCCTTCTCGGCGATGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGACCGAGCCGCCGACGCCGATCGACAAGGAC
CTGTACGATCTGCCGCCGGAGGAGTGGGGCGACGTCAAGCAGGTGCCAGGCTCGCTGCCGGCGGTGCTCGACTCCCTCGA
GGCCGACCACGACTACCTGCTCGACGGCGGCGTCTTCACGCCGGACCTGATCTCCACCTGGATCGACTGGAAGCGGACCA
ACGAGGTCGACCCGGTGCGGCTGCGCCCGACCCCGCACGAGTTCGCGATGTACTTCGACTGCTGA

Protein sequence :
MFANPEELLRYLKNEDVKFVDVRFCDLPGVMQHFNLPAESIDDELLTDGLAFDGSSIRGFQAIHESDMLLLPDVATAFID
PFRAQKTLALNFFIHDPFTREAYSRDPRNVAKKAEAYLAASGIADTAYFGAEAEFYIFDSIRHETSAHQSYYYIDSIEGW
WNTGRDEEGGNRGYKTAYKGGYFPVPPVDHYADLRDKIVRRMIDAGYTVERSHHEVGTAGQAEINYKFSTLLHAADQLQL
FKYIVKNETWVNGKTATFMPKPLFGDNGSGMHTHQSLWLNGEPLFYDETGYAGLSDTARWYIGGLLQHAPSLLAFTNPTV
NSYRRLVPGFEAPVNLVYSQRNRSACTRIPVTGSNPKAKRVEFRVPDPSANVYLAFSAMLMAGLDGIKNKTEPPTPIDKD
LYDLPPEEWGDVKQVPGSLPAVLDSLEADHDYLLDGGVFTPDLISTWIDWKRTNEVDPVRLRPTPHEFAMYFDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-89 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strop_3332 YP_001160144.1 glutamine synthetase, type I VFG1399 Protein 4e-171 70