Gene Information

Name : Strop_3209 (Strop_3209)
Accession : YP_001160021.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 3675767 - 3676513 bp
Length : 747 bp
Strand : -
Note : PFAM: alanine racemase domain protein

DNA sequence :
ATGACCAACACCCCCGCCACGGCACCGACCAATCGGAACGCCGAGCTCGCAGCTGGCCTTGCCCGAGTCCGTACCCGAAT
CGCCGACGCCTGTGCGGCGGCCGGTCGGGATCCCGGGGAGGTGACCATGATCGCGGTGACCAAGACGTACCCGGCGAGTG
ACGTTGTCGCCCTGATCGGGCTCGGGGCCACTGAGGTGGGGGAGAACCGGGACCAGGAGGCCGCGGCGAAGGCGGCCGAG
GTGGCGGCGGCGGGGGTGACGCCCCGGTGGCACTTCATCGGCCAACTCCAGCGGAACAAGGCGAAGTCGGTGGTCCGGTA
CGCCGATGTCGTGCACTCGGTGGACAGTGTCCGGTTGGCCCGGGCGCTGGATCGGGCTGCGGGAGCGGAACGGGACCGGC
CGTTGGATGTGCTCCTTCAGGTCAGCATCGACGGGGCGGTGGGTCGCGGTGGTGCGTTGCCCGGCTCCGCCGACCCGGAT
GCGGGGCTCGATCCGCTGGCCGAGGTGGTGGCCGGTGTGGACGGGCTGCGGCTTACCGGTTTGATGGCGGTGGCACCGCT
GGGGTGGGAGCCGGACCGGGCGTTTGCCCGGCTGGCGGAGGTGGCGGCCGGGTTCCGGGTCCAGCATCCGCAGGCGACGT
TGTTGTCGGCGGGCATGAGCGGGGATCTGGAACCAGCGGTCCGGTACGGCGCGACACATGTCCGGGTGGGCAGCGCGTTA
CTCGGAATGCGCCCCACGCTGCGGTAG

Protein sequence :
MTNTPATAPTNRNAELAAGLARVRTRIADACAAAGRDPGEVTMIAVTKTYPASDVVALIGLGATEVGENRDQEAAAKAAE
VAAAGVTPRWHFIGQLQRNKAKSVVRYADVVHSVDSVRLARALDRAAGAERDRPLDVLLQVSIDGAVGRGGALPGSADPD
AGLDPLAEVVAGVDGLRLTGLMAVAPLGWEPDRAFARLAEVAAGFRVQHPQATLLSAGMSGDLEPAVRYGATHVRVGSAL
LGMRPTLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-15 44
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 2e-15 44
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-15 44
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-15 44