Gene Information

Name : Strop_3188 (Strop_3188)
Accession : YP_001160000.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Unknown
Product : alcohol dehydrogenase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 3659172 - 3660176 bp
Length : 1005 bp
Strand : -
Note : PFAM: Alcohol dehydrogenase, zinc-binding domain protein

DNA sequence :
ATGAATAGCGCCGCAAACCGTGAGATTCATCTGGCCGCACGTCCGCAGGGCTGGCCGACCGAGGACACCTTCCGGTTGGC
CACCACCGACGTCCCCACCCCCGGGCCCGGGCAGATCGTCGTCCGCAATACCTTTATGTCTGTCGATCCATATATGCGGG
GACGGATGAATGACGTTGCGTCGTACGTCCCGCCCTTCGCGTTGGACGCACCGCTCGACGGCGGGGCGGTCGGCGAGGTG
GTGGCGAGCGAGGCCGATGGCTTCGCCGTCGGCGACACCGTGCTCCACGGGCTCGGCTGGCGGGAGTACGCGCTGTTGGA
TGCGTCGACCGTCCGGACGGTCGATCCTGCCCTCGCCCCGGTCAGCACGTACCTCGGAGTGCTCGGCATGACCGGGCTCA
CCGCGTACGCCGGACTGCTCGAGGTTGCCGCGATGCAGCCGGGGGACACCGTCTTCGTCTCTGGTGCGGCCGGTGCGGTG
GGCAGCATGGTCGGTCAGATCGCCAAGCTCCGCGGCGCTGGCCGGGTGGTCGGCAGCGCCGGCTCACCGGCCAAGGTCGA
GCGGCTGCGGGCGCTCGGCTTCGACGCCGCCTTCGACTACCACGACGGCCCGGTGCTGGACTCGCTGCGCTCCGCCGCGC
CGGACGGGATCGACGTCTACTTCGACAACGTGGGCGGCGAGCACCTGGAGGCGGCGATCGGCGCGATGCGGCAGAACGGC
CGGGCCGCGATCTGCGGGATGATCGCCCAGTACAACGCGGCTGAGCCGCCGGCTGCCCCGCGCAACCTGGCGATGATCAT
CAGCAAGCGGCTCACCCTCCGCGGCTTCATCGTCTCCGACTACGGGCAGCTGGGCGAGCAGTTCGTGCAGGAGGTCGGCG
GCTGGTTGCGCGACGGGAAGCTCAGCTACGACGAGACGATCATTGACGGCATCGAGAACGCTCCGGCGGCCTTCCTGGGC
CTGCTCCGTGGCGAGAACCTCGGCAAGATGCTGGTCCGGGTCTGA

Protein sequence :
MNSAANREIHLAARPQGWPTEDTFRLATTDVPTPGPGQIVVRNTFMSVDPYMRGRMNDVASYVPPFALDAPLDGGAVGEV
VASEADGFAVGDTVLHGLGWREYALLDASTVRTVDPALAPVSTYLGVLGMTGLTAYAGLLEVAAMQPGDTVFVSGAAGAV
GSMVGQIAKLRGAGRVVGSAGSPAKVERLRALGFDAAFDYHDGPVLDSLRSAAPDGIDVYFDNVGGEHLEAAIGAMRQNG
RAAICGMIAQYNAAEPPAAPRNLAMIISKRLTLRGFIVSDYGQLGEQFVQEVGGWLRDGKLSYDETIIDGIENAPAAFLG
LLRGENLGKMLVRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 9e-61 42