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Name : Strop_3089 (Strop_3089) Accession : YP_001159904.1 Strain : Salinispora tropica CNB-440 Genome accession: NC_009380 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 3539652 - 3541877 bp Length : 2226 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGCACGGATCCCCGGGCGGACGTTTAGGACCGCTCGATAAGGTCACCGGTGAGGGTTCCGCCCATCTGTCGAGGAGCAC AACCAACGTGGCTGACAACCGACCCGAGCTTCCTGCACTCAACTGGTCCGACCTCGACCGTCAGGCGGTCGACACGGTCC GCGTGCTGGCCATGGACGCCGTCGAGAAATCCGGCAACGGCCACCCCGGCACCGCGATGAGCCTGGCGCCCGCGGCCTAC CTACTCTTCAACCGGGTCATGCGACATAACCCCGCCGACCCGACCTGGCCCGGCCGCGACCGCTTCGTGCTCTCCGCCGG GCACTCCAGCCTCAGCCTCTACATCCAGCTCTACTTCTCCGGCTATCCGATGAGCCTCACCGACCTCGAGGGGCTGCGGC AGTGGGGCTCGCTCACCCCCGGTCACCCCGAGTACGGGCACACCCCGGGGGTGGAGACCACCACCGGCCCGCTCGGACAG GGCCTGGGCAACGCGGTCGGGATGGCGATGGCCGCCCGCCGTGAACGCGGGCTGTTCGACCCCGAGCCGAAGCTCGGCAC CTCGGTCTTCGACCACGACATCTGGTGTATCGCCTCCGACGGCGACATCGAGGAGGGGGTCAGCCACGAGGTCAGCGCCC TCGCCGGCCACCAGCAGCTGGGCAATCTCTGCGTGATCTACGACGACAACGAGATCTCGATCGAGGACGACACCCGGATC GCCAAGAGCGAGGACGTCGCGGCCCGCTACCGGGCGTACGGGTGGCACGTGCAGACGGTCGACTGGCGGCGCGGCGACGC CGACCAGGACGACTACCACGAGGACGTGGCCACGCTGTACCGGGCGCTGCTGGCCGCCAAGGCCGAGACCGGTCGGCCGT CGTTCATCGCCCTGCGCACCATCATCGGCTGGCCGGCGCCGAACAAACGGAACACCGGCAAGATCCACGGTTCGGCGCTC GGTGCCGACGAGGTCGCGGCGACCAAGGAACTCCTCGGCTTCGACCCGCAGCGCACCTTCGAGGTCGACGAGGGCGTCCT CAAGCACACCCGCCAGGTGCGCGAACGCGGCATCGCCGCCCAGCGTGAGTGGACCGAGACCTTCGAGGCCTGGGGGCAGG CGAACCCGGAACGCAAGGAGCTCTGGGACCGAATGGCCACCCGGACGCTGCCACGAGGCTGGACGGACGCCCTACCCGCG TTCCCCGCCGACGCCAAGGGCATCGCCACCCGCGCCGCCTCCGGCACGGTCCTCGGCGCGCTCGCACCGGTGCTGCCGGA GCTGTGGGGCGGCTCGGCAGACCTGGCGGACAGCAACAACACCACCATGAAGGGCGAGCCGTCCTTCATCCCGGCCGAGC ATGCCACCAAGGACTTCCCGGGCAACGAGTACGGCCGCACGCTGCACTTCGGCGTCCGCGAACACGCGATGGGCGCCATC CTCAACGGGATCGCTCTGCACGGTGGCACCCGCCCGTACGGCGGTACGTTCCTCGTCTTCAGCGACTACATGCGCCCGTC GGTACGCCTCGCGGCGATGATGAAGCTGCCGGTGACCTACGTCTGGACACACGACTCGATCGGCCTCGGCGAGGACGGTC CGACCCACCAACCGGTGGAGCAGCTGACCTCGCTGCGAGCAATCCCCGGACTGGATGTGGTACGTCCCGCCGACGCGAAC GAGACCGCGTGGGCCTGGCGGCAGATCCTGACGCATACCGATCGGCCGGCCGCGTTGGCACTGAGCCGCCAGCCGTTGCC GACCCTGGATCGATCCGTGCTCACCAGCGCGGAAGGGGTGGCCCGCGGCGGGTACGTGCTGGTCGACGCTGTTGGCGGCA AGCCGCAGGTGATCCTTCTCGCCACCGGTTCGGAGGTGCAGCTCTGCCTCACCGCCCGGGAGCGGCTGGAGGCCGACGGC ACCCCCACCCGGGTCGTCTCCATGCCCTGCCAGGAGTGGTTCCGGGCTCAGGATGAGGCGTACCAGGAGTCGGTCCTACC CCGTGGGGTAAAGGCACGGGTGAGCGTGGAGGCGGGCGTCGCGATGTCCTGGCGGGCCTTCGTCGGTGACTGCGGCGAGA GCATCAGCCTGGAGCACTTCGGGGCGAGCGCCCCGCACACCGTGCTCTTCGAGCAGTTCGGTTTCACCCCGGACCGGATC GTGGGTGCGGCGCACGCCGCGCTGACCCGGGTCGGCGACATCACCGGTAATCCGACCGGCAACTGA Protein sequence : MHGSPGGRLGPLDKVTGEGSAHLSRSTTNVADNRPELPALNWSDLDRQAVDTVRVLAMDAVEKSGNGHPGTAMSLAPAAY LLFNRVMRHNPADPTWPGRDRFVLSAGHSSLSLYIQLYFSGYPMSLTDLEGLRQWGSLTPGHPEYGHTPGVETTTGPLGQ GLGNAVGMAMAARRERGLFDPEPKLGTSVFDHDIWCIASDGDIEEGVSHEVSALAGHQQLGNLCVIYDDNEISIEDDTRI AKSEDVAARYRAYGWHVQTVDWRRGDADQDDYHEDVATLYRALLAAKAETGRPSFIALRTIIGWPAPNKRNTGKIHGSAL GADEVAATKELLGFDPQRTFEVDEGVLKHTRQVRERGIAAQREWTETFEAWGQANPERKELWDRMATRTLPRGWTDALPA FPADAKGIATRAASGTVLGALAPVLPELWGGSADLADSNNTTMKGEPSFIPAEHATKDFPGNEYGRTLHFGVREHAMGAI LNGIALHGGTRPYGGTFLVFSDYMRPSVRLAAMMKLPVTYVWTHDSIGLGEDGPTHQPVEQLTSLRAIPGLDVVRPADAN ETAWAWRQILTHTDRPAALALSRQPLPTLDRSVLTSAEGVARGGYVLVDAVGGKPQVILLATGSEVQLCLTARERLEADG TPTRVVSMPCQEWFRAQDEAYQESVLPRGVKARVSVEAGVAMSWRAFVGDCGESISLEHFGASAPHTVLFEQFGFTPDRI VGAAHAALTRVGDITGNPTGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-123 | 45 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-118 | 44 |
