Gene Information

Name : Strop_2760 (Strop_2760)
Accession : YP_001159580.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3107805 - 3108614 bp
Length : 810 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
GTGAACAGGAACAAGGACAGGCGAACGTCGGTCAACGGCACCGACGCGGTGTGGCTGGATGACGTGCGCAAGGCGTACGG
GCGCGGCGAGAGCCGGGTTGAGGCACTGCGGGGCGTCACGATGAGCTTCACGCGGGGTAGCTTCACCGCCGTGATGGGGC
CCTCGGGCTCCGGCAAGAGCACCTTCCTGCACTGCGCGGCGGGCCTCGACCTACCCTCGTCGGGCTCGGTGGTGCTGGAC
GGCCAGGAACTCAACGGCATGAACGAGAACCAGCTCACCCGGCTGCGCCGGGAGCGGGTCGGCTTCATCTTCCAGGCGTT
CAACCTGATGCCGGCACTGAACGTCGAGCAGAACGTCGGCCTGCCGTTTCGGTTGGCCGGCCGCCGGCCCGACCGCTCCT
CCGTGGTGGAGGTGCTGGGCCGGGTGGGGCTGGCCGAGCGGCGCAAGCACCTGCCGAGCGAGCTCTCCGGCGGTCAGCAG
CAGCGGGTCGCGATCGCGCGCGCGCTCATCATGCGGCCGGCGGTCATCTTCGCCGACGAGCCGACCGGCGCGCTGGACAC
CCAGACCACCATCGAGGTGCTGCAACTGTTCCGCGAGACGGCGGTCAGCGGCGGCCAGACGATCATCATGGTGACCCATG
ATCCGGTCGCGGCCTCCGCCGCGCATCGGGTGCTGTTCCTTGCCGACGGGCAGTTCATCGGTGAGCTGGAGGCCCCGACC
GCCGACGTGGTGGCTGAGCGGATGACCCACCTGACCGCATGGCAGCAGACCCGCACAACCCAGTCCACCGGCCGGGGCGG
TTTCCGATGA

Protein sequence :
MNRNKDRRTSVNGTDAVWLDDVRKAYGRGESRVEALRGVTMSFTRGSFTAVMGPSGSGKSTFLHCAAGLDLPSSGSVVLD
GQELNGMNENQLTRLRRERVGFIFQAFNLMPALNVEQNVGLPFRLAGRRPDRSSVVEVLGRVGLAERRKHLPSELSGGQQ
QRVAIARALIMRPAVIFADEPTGALDTQTTIEVLQLFRETAVSGGQTIIMVTHDPVAASAAHRVLFLADGQFIGELEAPT
ADVVAERMTHLTAWQQTRTTQSTGRGGFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-44 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-45 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-45 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-45 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strop_2760 YP_001159580.1 ABC transporter-like protein CP001581.1.gene798.p Protein 7e-48 50
Strop_2760 YP_001159580.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-44 47
Strop_2760 YP_001159580.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-44 46
Strop_2760 YP_001159580.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-39 44