Gene Information

Name : Strop_2554 (Strop_2554)
Accession : YP_001159376.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 2874477 - 2875505 bp
Length : 1029 bp
Strand : +
Note : PFAM: transport system permease protein

DNA sequence : 
ATGATCGTCGTACGTACCCCGGGCGGCGTCTCGCTGCGCCTGCGCCCCCGCGCCCTCGCCGTCGGCCTGACCTGCGGGCT
CCTCACCCTGGCCGTGGGAGTGCTGGCACTGGGTAGCGGCGACTACCCGATGAGCGCCGCCGACGTGCTCCGTACCCTGG
CTGGCGGCGGTAGCCCAGCCGAGGAGTTCATCGTCCACGAGCTACGGCTACCCCGCCTCGCCACCGCCATCGCGGTCGGC
GCCGCACTCGCTCTGGCCGGTGCCGTCTTCCAGACCCTGGTCCGCAACCCCCTCGGCAGTCCCGACCTGCTCGGCTTCAC
CCAGGGCGCGGCGACCGGTGCGCTGGTGGTGGTCGTCATCGGCGGCACCAGCACGATGCTCTCCGGCGCCGCCGCCGTCA
GTGGATTCGCCACCGGCCTCCTGGTCTACGTGATCGCCTGGCGACGCGGGGTGCACGGCTACCGGCTCGTGCTGGCCGGC
ATCGGGGTCGCCGCGATCCTCACCGGCATCAACGGGTGGCTGCTCACCCGTGCCCCGCTGATGGACGCCGCCCGGGCCGT
ACTCTGGCTCACCGGCAGCCTCGACGGCCGGGGCTGGATACACGCCCTACCGGTCCTGGTCGCCCTCGCCCTGCTCGGGC
CGGCGGTGCTGGCCGGTGCCGGGCCCGCGCTGCGGCTGATGGAGATGGGCGATGACTCTGCCAGCGCCCTCGGTGTGCCG
GTCGAGCGGCTGCGGCTGGCCCTGCTCGGTGCGGCCGTGCTGTTGGTCTCCCTCGCCTCGGCGGCTGCCGGCCCGGTCAA
CTTCGTGGCGCTCACCGCGCCGCACCTGGCCCGACGGCTCACCCGCGCGCCCGGGCCCAACCTGCTGCCCTCGGCACTGC
TCGGGGCGCTACTACTGGTCGTTGCCGACCAGATCGCCCAGCGCGCCGTTCCCGGCCACCAGCTGCCGGTGGGCGTGGTG
ACCGGCCTGATCGGTGGCGGATACCTGATCTGGCTACTGGCAGCCGAGCGTCGGGCAGGCCGACTGTGA

Protein sequence : 
MIVVRTPGGVSLRLRPRALAVGLTCGLLTLAVGVLALGSGDYPMSAADVLRTLAGGGSPAEEFIVHELRLPRLATAIAVG
AALALAGAVFQTLVRNPLGSPDLLGFTQGAATGALVVVVIGGTSTMLSGAAAVSGFATGLLVYVIAWRRGVHGYRLVLAG
IGVAAILTGINGWLLTRAPLMDAARAVLWLTGSLDGRGWIHALPVLVALALLGPAVLAGAGPALRLMEMGDDSASALGVP
VERLRLALLGAAVLLVSLASAAAGPVNFVALTAPHLARRLTRAPGPNLLPSALLGALLLVVADQIAQRAVPGHQLPVGVV
TGLIGGGYLIWLLAAERRAGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strop_2554 YP_001159376.1 transport system permease VFG0928 Protein 2e-30 47