Gene Information

Name : Strop_2536 (Strop_2536)
Accession : YP_001159358.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2853948 - 2854586 bp
Length : 639 bp
Strand : +
Note : -

DNA sequence : 
ATGACGGGCGTTCCAACCGATCCGAGCACCCTGCATCCGATGCCCGAACGGCCACGTGTGGTGCTGTTGAAGCCACTGGT
AGCCTCGCCACTGATCGAAGTTGGGGAATTCACCTACTACGACGACCCGGACGATCCGACCGCTTTCGAGGTTCGCAACG
TTCTCTATCACTTCGGGCCGGAGCGGCTGATAATCGGAAAGTTCTGCGCGTTGGCCGAGGGCGTACGGTTCATCATGAAC
GGCGCCAATCACCGCATGGACGGGCCCTCGACCTTCCCGTTTCCGATTATGGGTGGCTCCTGGAGCGAACACTTCGATCT
CATCACCAACCTGCCCGGGCGGGGTGACACGGTGGTTGGTAACGACGTGTGGTTCGGCTACCACACCATGATTATGCCTG
GTGTTCACATCGGCAGCGGGGCGATCATTGCTGCTGGATCTGTGGTCGTCGACGATGTCCCCGCATATAGCATCGTCGGC
GGCAACCCGGCCAGGGTGATCCGCCGCCGCTTCCCCGAAGAAGACGTTGCCCGCCTGATGGCGGTTGCCTGGTGGGACTG
GCCGCTGCAACACATCACCGATCACATCCGCACGATCATGTCCGGCAGTATTGACGCCCTGGAGACCGTGGCGCCATAA

Protein sequence : 
MTGVPTDPSTLHPMPERPRVVLLKPLVASPLIEVGEFTYYDDPDDPTAFEVRNVLYHFGPERLIIGKFCALAEGVRFIMN
GANHRMDGPSTFPFPIMGGSWSEHFDLITNLPGRGDTVVGNDVWFGYHTMIMPGVHIGSGAIIAAGSVVVDDVPAYSIVG
GNPARVIRRRFPEEDVARLMAVAWWDWPLQHITDHIRTIMSGSIDALETVAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 9e-29 44
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 7e-29 42
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 7e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strop_2536 YP_001159358.1 hypothetical protein AM180355.1.gene2499. Protein 3e-47 44
Strop_2536 YP_001159358.1 hypothetical protein AY123251.gene2.p01 Protein 3e-29 44
Strop_2536 YP_001159358.1 hypothetical protein JF268688.1.gene6.p01 Protein 1e-28 43
Strop_2536 YP_001159358.1 hypothetical protein AY740681.1.gene5.p01 Protein 4e-29 42
Strop_2536 YP_001159358.1 hypothetical protein AF322577.2.gene4.p01 Protein 4e-29 42