|
Name : Strop_1796 (Strop_1796) Accession : YP_001158637.1 Strain : Salinispora tropica CNB-440 Genome accession: NC_009380 Putative virulence/resistance : Unknown Product : response regulator receiver Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 2052466 - 2053158 bp Length : 693 bp Strand : - Note : PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2 DNA sequence : GTGACCGCCGAGCCGGCGACCAGCCCGGCCATCCGGATCCTGCTCGCCGACGACCACCACCTCGTGCGTACCGGGTTCCG GGTCATCCTCGAGGTGGAGAGCGACATGCACGTCGTCGGGGAGGCCGCGGACGGCGAACGGGCGGTGAGCATGGCCGGGG CACTCCGCCCAGACGTGGTCCTGATGGACGTGGAGATGCCCCGGGTCGACGGGCTGGAGGCCACCCGACGGATCGTCGCG GACGCGGACCGATCGAACGGACCGGCGGTGTTGATCCTCACCACCTTCGACCGGGATGACTATCTGTTCGCCGCGCTTCG CGCCGGAGCAAGCGGATTCCTGCTGAAGAACGGCACGCCGGAGGCGCTCGTGGCGGCGATCCGGGTGGTCGCTCGAGGCG AGGGTCTCATCGCCCCCGAACTCACCCGGCGAGTGATCGCCGCCTTCGCCAGGCCGGGGGGCGAACCCACGACGACGGCC GTGGCGCTGTCGGACCTCACGCCGCGGGAGCACGAGGTGCTGGTGCTGGTCGCCTCGGGCGCGAGCAACGCCGAAATCGC GGCCAACCTACGCCTCGGCGAAGCGACCGTGAAGACCCATGTCAGTCGGGTACTGGCCAAACTCGGCCTACGTGACCGGG TGCAGGCAGTCGTCTTCGCGTACGAACACGGGGTGGTGCGGCCAGGCGGGTGA Protein sequence : MTAEPATSPAIRILLADDHHLVRTGFRVILEVESDMHVVGEAADGERAVSMAGALRPDVVLMDVEMPRVDGLEATRRIVA DADRSNGPAVLILTTFDRDDYLFAALRAGASGFLLKNGTPEALVAAIRVVARGEGLIAPELTRRVIAAFARPGGEPTTTA VALSDLTPREHEVLVLVASGASNAEIAANLRLGEATVKTHVSRVLAKLGLRDRVQAVVFAYEHGVVRPGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| regB | YP_001220830.1 | putative two-component system response regulator | Not tested | chp/tomA region | Protein | 6e-31 | 44 |
| CD241_0088 | YP_005124357.1 | two-component system response regulator | Not tested | Not named | Protein | 2e-28 | 41 |
| DIP0091 | NP_938488.1 | two-component system response regulator | Not tested | Not named | Protein | 2e-28 | 41 |
