Gene Information

Name : Strop_1781 (Strop_1781)
Accession : YP_001158622.1
Strain : Salinispora tropica CNB-440
Genome accession: NC_009380
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2035201 - 2035881 bp
Length : 681 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
GTGCTCCTGGTCGAAGACGATCACGTCGTCCGCGGCGCAATGCTGCGCTCCCTCACCGGCCGGGGGCACGCCGTACACGC
TGTTGGCACCGCGCTCGAGGCCCTGCGCCGGGTGGCGGCGGAGACACCCGACCTCGTGGTGCTCGACCTGGGCCTGCCCG
ACCTCGACGGTTCCGACGCCCTTCGGATGCTGCGGGGTATCACCGACATCCCGATCATCATCGCCACCGCGCGCGACGAC
GAACAGTCGGTGGTCCGGCTGCTGCGCGCCGGCGCCGACGACTACATGGTCAAGCCGTTCACCGGGGCGCACCTGGACGC
CCGGATCACGACCGTGCTGCGGCGGGTCGGACGGGCCAGTCGGACAGTCCAGCCCGCCGTTCACGAGGTCGGCGGGCTGC
GCATCGATGTCGGCGAACGCAGTGCCGAACTGGACGGGGAGCCGTTGGCACTGACCCGTAAGGAGTTCGACCTGCTGGCG
TACCTGGCCGCGCGACCGGGCCGGGTAGTGTCGCGCCGGGAACTCTTGGAGGAGGTATGGCGACAACCGTCGGTCGGCGA
GGACCAGACCATCGACGTTCACCTCTACTGGCTACGTCGCAAAATGGGCGAGACCGCGGCGAAGCCGCGCTACCTGCGCA
CCGTGCGGGGGGTGGGCCTCCGACTGGTAGCGCCCGGCTGA

Protein sequence : 
MLLVEDDHVVRGAMLRSLTGRGHAVHAVGTALEALRRVAAETPDLVVLDLGLPDLDGSDALRMLRGITDIPIIIATARDD
EQSVVRLLRAGADDYMVKPFTGAHLDARITTVLRRVGRASRTVQPAVHEVGGLRIDVGERSAELDGEPLALTRKEFDLLA
YLAARPGRVVSRRELLEEVWRQPSVGEDQTIDVHLYWLRRKMGETAAKPRYLRTVRGVGLRLVAPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-16 41
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strop_1781 YP_001158622.1 response regulator receiver VFG1389 Protein 3e-23 41
Strop_1781 YP_001158622.1 response regulator receiver VFG0596 Protein 1e-18 41