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Name : Strop_1706 (Strop_1706) Accession : YP_001158548.1 Strain : Salinispora tropica CNB-440 Genome accession: NC_009380 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1953291 - 1955702 bp Length : 2412 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold DNA sequence : GTGACCCTCTCTGTTTCTCAGCGGATCGCCGAGGAGCTCGGCGTCGCCGAGCGCCAGGTACACGCAGCCGTGGAACTACT CGACGGCGGCGCGACCGTGCCGTTCATCGCCCGCTACCGCAAGGAGGCCACCGGCCTGCTCGATGACACCCAGCTGCGTA CTCTCGAGGAGAGACTGCGCTACCTGCGCGAGTTGGACCAGCGGCGGGCCGCCATCCTGGAGTCCATCGGCAGCCAGGGC AAGCTCGACGAGGCCCTGACCGCACAGATCATGGCCGCCGACTCGAAGTCTCGGCTGGAGGACATCTACCTGCCGTACAA GCCCAAGCGGCGGACCCGCGCGCAGATCGCCCGCGAGGCCGGCCTGGAGCCCCTCGCCGACACCCTGCTCGACGAGCCAG CCCAGGACCCGCGGGCGACGGCCGCCGGGTTCGTCGACCCGGACCGGGGCATCGCCGACGCCGCCGCCGCGCTCGACGGC GCCCGAGCCATCCTGGTCGAGCGGTTCGCCGAGGATGCCGACCTGATCGGCACGCTGCGCGAGCAGATGTGGTCCCGGGG CCGGCTGGTGTCCCGGGTACGCGATGGCCAGGCGACGACGGGCGCCAAGTTCGCCGACTACTTCGACTTCGCCGAGCCGT ACCCGAAACTGCCCTCGCACCGGGTTCTCGCCGTATTCCGCGGGGAGAAGGAGGGCGTACTCGACCTGACGATGGAGCCG GAGGAGGCCGCCGAGACGGTGGCCACCGGGCCGACCCGGTATGAGGCGGCCATCGCCGCCCGGTTCGGAGTCAGCGACCA GGGACGGCCAGCTGACCGCTGGCTCTCCGACACGGTTCGCTGGGCCTGGCGTACCCGGATCCTCATCCACCTCGGCGCGG ACCTGCGCCTGCGACTGTGGCAGGCCGCCGAGACGGAGGCGGTACGAGTCTTCGCCACGAACCTGCGGGACCTGCTGCTG GCCGCCCCGGCCGGCACCCGGGCGACGATGGGGCTGGATCCGGGCCTGCGTACCGGGGTGAAGGTCGCCGTCGTTGACGC CACCGGCAAGGTGGTCGCCACCGACACCATCTACCCGCACGAACCACGCCGGCAGTGGGACGCCTCGATCGAGACCCTCG CCCGGCTGGCCGCCGCGCACCAGGTGGAGTTGGTGGCGATCGGTAACGGCACCGCGAGCCGGGAGACCGACCGACTGGCC GGAGAGCTGATCCGGCGCCACCCCCACCTGAACCTCACCAAGCTCGTCGTCTCCGAGTCCGGCGCCTCCGTCTACTCGGC GTCCGCCTACGCCGCGCAGGAACTGCCGGGCCTGGACGTGTCGCTGCGGGGAGCAGTCTCCATCGCGCGCCGTCTCCAGG ATCCCCTCGCCGAGCTGGTCAAGATCGACCCACGCTCCATCGGAGTTGGACAGTACCAACACGACCTGTCCGAGGTGACC TTGTCCCGGTCGCTCGACGCGGTCGTCGAGGACTGCGTCAACGCGGTCGGGGTCGATGTCAACACCGCCTCCGCACCGCT GCTGACCCGAGTCTCCGGCATCGGCGCCGGGCTGGCGGAGAACATCGTGCTGCACCGAGACGCGAACGGGCCGTTCCGGA GCCGACGCGACCTGCGGCAGGTCCCCCGACTCGGCCCGAAGGCGTTCGAGCAGTGCGCCGGCTTCCTGCGCATCCCCGGT GGTGAGGACCCGCTGGACTCGTCCAGCGTGCATCCGGAGGCGTACCCGGTGGTGCGGCGGATCCTCGCCGCGGTCAAGCA GGAACTACCAGCGGTGATCGGCCGGAGTGCGGTCCTGCGCGGGCTGCGGGCCACCGACTTCGTCGATGACACCTTCGGGC TTCCGACGGTCACCGACATCCTCACCGAGTTGGAAAAGCCCGGCCGGGACCCGCGGCCGGAGTTCCGCACCGCCACCTTC GCCGAGGGCGTCGAGACAATCGCCGATCTGGTGCCCGGCCTCATCCTGGAGGGGGTGGTCACCAACGTGGCCGCCTTCGG CGCGTTCGTGGACATCGGTGTGCACCAGGACGGCCTGGTGCACGTCTCGGCGATGTCCCGCACCTTCGTCCGGGACCCGC ACGAGGTGGTGAAGTCCGGTGACGTGGTGAAGGTCAGGGTCCTCGACGTGGACGTGCCGCGCAAACGCATCTCGCTGACC CTGCGCCTGGACGATACCGAGGCCAGCCGCGGCGGCGGGCGGGGGCAGCAGGGGGACCGCGGCGGCGACCGGGAAACCGG CGGCCGTTCCCAAGGCCGCGGCGGACAGGGCGGGCGCGGCGGACAAAGCGGCCGCTCCCAAGGCCGCGGCGGGCAGAGCG GGCACGGCGGACAGCCGCGGTCGGGACGTGGGGGCGGGGCCCCGGCCAACGATGCGATGGCAGATGCCCTACGCCGCGCC GGTCTCGCCTGA Protein sequence : MTLSVSQRIAEELGVAERQVHAAVELLDGGATVPFIARYRKEATGLLDDTQLRTLEERLRYLRELDQRRAAILESIGSQG KLDEALTAQIMAADSKSRLEDIYLPYKPKRRTRAQIAREAGLEPLADTLLDEPAQDPRATAAGFVDPDRGIADAAAALDG ARAILVERFAEDADLIGTLREQMWSRGRLVSRVRDGQATTGAKFADYFDFAEPYPKLPSHRVLAVFRGEKEGVLDLTMEP EEAAETVATGPTRYEAAIAARFGVSDQGRPADRWLSDTVRWAWRTRILIHLGADLRLRLWQAAETEAVRVFATNLRDLLL AAPAGTRATMGLDPGLRTGVKVAVVDATGKVVATDTIYPHEPRRQWDASIETLARLAAAHQVELVAIGNGTASRETDRLA GELIRRHPHLNLTKLVVSESGASVYSASAYAAQELPGLDVSLRGAVSIARRLQDPLAELVKIDPRSIGVGQYQHDLSEVT LSRSLDAVVEDCVNAVGVDVNTASAPLLTRVSGIGAGLAENIVLHRDANGPFRSRRDLRQVPRLGPKAFEQCAGFLRIPG GEDPLDSSSVHPEAYPVVRRILAAVKQELPAVIGRSAVLRGLRATDFVDDTFGLPTVTDILTELEKPGRDPRPEFRTATF AEGVETIADLVPGLILEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSRTFVRDPHEVVKSGDVVKVRVLDVDVPRKRISLT LRLDDTEASRGGGRGQQGDRGGDRETGGRSQGRGGQGGRGGQSGRSQGRGGQSGHGGQPRSGRGGGAPANDAMADALRRA GLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
