Gene Information

Name : Pnuc_0939 (Pnuc_0939)
Accession : YP_001155719.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 938624 - 939298 bp
Length : 675 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_A1385 ABC transporter related

DNA sequence : 
ATGAGTATTCCAGGCAAAGTTCTCAGTGCCAACCATCTTGGCAAAAGTGTTTCATCTAGTGATGGCGCTCTTAGCATTTT
GCATGACATTTGCTTTGATATTGAAGCCGGTGAAAGCGTGGCCATTACTGGCACCTCAGGATCCGGAAAAAGCACCTTGT
TAAGTATTTTGGCTGGGTTAGATGTGCCAAGCACTGGAAATGTCACTTTGATGGGTCAGGACTTAAATTCGCTAGACGAA
GATGGCAGAGCTATCTTGCGGGGTGCTCACGTTGGGTTTGTTTTCCAAACCTTTCAGCTGTTACCCCATTTGACGGCCTT
AGAGAACGTCATTTTGCCAGCGGAGTTAAATGGGCTTAAAAATGCTCAGGATCAAGCCAAATCTTGGCTAACTCAGGTTG
GTCTTCAGGATCGCTTCAACCACTTTCCAGGCACTCTTTCAGGAGGTGAGCAGCAGCGGGTAGCCCTGGCTAGGGCGTTT
ATTAATAAACCTGACATCCTTTTCGCAGATGAGCCCACAGGCAGCCTTGATGAGACTAGTGGGGATAGGGTGATTGAGCT
TCTTTTTGGCCTCAATAAGGCCAATAAATCGACCCTGATTTTAGTAACCCATGATTCAGCCTTGGCTGGGCGGTGTCAGC
GTCAATTACACCTTCAGGGTGGGCGATTGTTATAG

Protein sequence : 
MSIPGKVLSANHLGKSVSSSDGALSILHDICFDIEAGESVAITGTSGSGKSTLLSILAGLDVPSTGNVTLMGQDLNSLDE
DGRAILRGAHVGFVFQTFQLLPHLTALENVILPAELNGLKNAQDQAKSWLTQVGLQDRFNHFPGTLSGGEQQRVALARAF
INKPDILFADEPTGSLDETSGDRVIELLFGLNKANKSTLILVTHDSALAGRCQRQLHLQGGRLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-22 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-22 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnuc_0939 YP_001155719.1 ABC transporter NC_008702.1.4606598. Protein 3e-30 51
Pnuc_0939 YP_001155719.1 ABC transporter NC_012469.1.7686878. Protein 7e-31 45
Pnuc_0939 YP_001155719.1 ABC transporter NC_012469.1.7685735. Protein 9e-25 44