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Name : Pnuc_0692 (Pnuc_0692) Accession : YP_001155474.1 Strain : Polynucleobacter necessarius QLW-P1DMWA-1 Genome accession: NC_009379 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 691595 - 692905 bp Length : 1311 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATCCACAATTACTTCGCAAAGATATCGCTGCAGTGCAGGCGCGCTTAGCCACCCGTAAATTTCAGCTGGATGT TGAGAAATTCAACACTCTAGAGTCTGAGCGCAAATCTTTACAAACCCGCACTGAAGAGTTACAAGCCAAACGCAATCAAT TGGCTAAAGCAATTGGTATGAAAAAAGGTAAGGGTGAAGATGCGGCTGCTGAAATGGCTGAAGCTAGTCAAATCAACGTG GATATGGAATCAGGCGCTGCAAGATTAAGCGTGCTTCAAGCAGAGATTGCTGATTTCTTGATGGGCATTCCCAATCTTCC CGATGAATCTGTTCCAGCCGGTAAAGATGAAACTGAGAACAAGGAAGTCAAAGTGTGGGGTGAGCAACCCATGTTTGATT TCGAGATTAAAGATCACGTAGATCTCGGTGGTCCATTGGGTCTCGATTTTGAAGTGGCTGCAAAGATTAGTGGCTCACGC TTTGTCGTGCTCAAGGGACCTATCGCTCGATTGCATCGCGCATTAGCGCAATTCATGATCGATACGCATGCAACTCACCA TGGCTATCAAGAAGTCTATGCGCCTTATATGGTCAATGCTGCTTCTATGCGTGGAACTGGTCAATTGCCAAAGTTCGAAG AAGACCTCTTTAAAGTCCCGCGTCAAATGGGTGGTGAAGATGAGGGCGGCGAAGCCAAAACTGAAAACTTCTACCTTATT CCAACTGCAGAAGTGCCTGTCACAAACTTAGTCAGAGATGAAATCGTGAATGCCGATACTCTTCCGCTGAAGTTTGTTGC TCATACCCCATGCTTCCGCTCTGAAGCTGGCAGCTATGGTCGTGATGTACGCGGCATGATTCGTCAACATCAATTCGACA AAGTCGAGTTAGTGCAAATCACTAAACCAGAACACTCGATGCAAGCTCTCGAAGAATTGACGGGCCATGCAGAGCGTATA TTGGAATTACTCGAGCTACCTTACAGAAAAGTATTGCTCTGTACTGGAGACATGGGTTTTGGTAGCACCAAGACCTATGA CTTAGAGGTATGGGTGCCCTCTCAAAATGCGTATCGTGAGATTAGCTCTTGCTCAAGCATGGGTGATTTCCAGGCACGCC GTATGCAAGCTAGATTTAAAGCGGGCCAAGGTAAGCCGGAATTGCTTCATACCTTAAATGGTTCTGGCTTAGCTGTGGGT AGGGCGCTTGTTGCTCTGATTGAGAACAAACAACTAGTAGACGGCAGTATTGCTATTCCGAAAGCGCTACAGCCTTACTT GGGTGGCTTAGAGACGTTAAAGCCGAATTAA Protein sequence : MIDPQLLRKDIAAVQARLATRKFQLDVEKFNTLESERKSLQTRTEELQAKRNQLAKAIGMKKGKGEDAAAEMAEASQINV DMESGAARLSVLQAEIADFLMGIPNLPDESVPAGKDETENKEVKVWGEQPMFDFEIKDHVDLGGPLGLDFEVAAKISGSR FVVLKGPIARLHRALAQFMIDTHATHHGYQEVYAPYMVNAASMRGTGQLPKFEEDLFKVPRQMGGEDEGGEAKTENFYLI PTAEVPVTNLVRDEIVNADTLPLKFVAHTPCFRSEAGSYGRDVRGMIRQHQFDKVELVQITKPEHSMQALEELTGHAERI LELLELPYRKVLLCTGDMGFGSTKTYDLEVWVPSQNAYREISSCSSMGDFQARRMQARFKAGQGKPELLHTLNGSGLAVG RALVALIENKQLVDGSIAIPKALQPYLGGLETLKPN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-97 | 50 |
