Gene Information

Name : Pnuc_0511 (Pnuc_0511)
Accession : YP_001155295.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Unknown
Product : AMP-dependent synthetase/ligase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG0318
EC number : -
Position : 503250 - 504905 bp
Length : 1656 bp
Strand : +
Note : PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3136 AMP-dependent synthetase and ligase

DNA sequence :
ATGATGGCCAATATTTATGAGCAAGGTTTAGAGCGAAACCCCGCCAACTACACCCCAATTACTCCCATATTGTTTTTGGA
GAGATCGGCCGAAATTTATCCTAATAAGACAGCAATCATTCATGGAAAGTTGCGTCAAACATGGCAACAAACTTATGAGC
GTTGTCGCCGCTTAGCCAGCGCCCTACAAAAGCGTGGCATTGGTCTAGGCGATACGGTGGCAGTGATGTTGCCAAATACT
CCCCCGATGGTAGAGGCGCACTTTGGCATTCCGATGGCAGGTGCTGTATTGAACGCACTAAATACTCGATTAGATGCTGA
GTCAGTTGCATTCATGCTTAATCATGGTGAAGCAAAGGTAGTAATTGTCGATCCTGAGTTTTCTGGCGTGATGAAGAAAG
CGCTTGAAATCGTAAAAAAAGATAGTGGCCGTGAAATCTTGGTGATCGATGTCGAAGAAAAAGAATTTGATGTTCCTGGT
GAGTGTTTAGGCACTGTGACTTACGATCAACTGCTATCTGAAGGTGATCCAGAATTTCCTTTGATCGTGCCTGAAGATGA
GTGGCAAGCGATTTGCTTAAATTACACCTCGGGAACGACAGGTAACCCGAAAGGGGTGGTTTATCACCATCGTGGTGCTG
CGATTAATGCGGTATCGAATGTGTTGGATTGGGACATCAATAAACATCCTATTTATTTATGGACATTACCCATGTTCCAT
TGCAATGGCTGGTGCTTCCCATGGACGATTGCTGCTCGTGCAGGCGTAAATGTTTGTTTACGTCGAGTTGACGCGCAACA
TATTTTTGCGGCGATTAAAGAGCATGGTGTGACTCATTATTGTGCGGCACCGATTGTTCATAACCTGCTGGTAAATGCCC
CTGATGAGCTCAAGGTAGGTGTCCCATCAGGCGTTAAGGGTTTAATTGCTGGGGCTGCACCTCCAGCCTCGATTATTGAG
GGCATGGAAAAGCTGGGTTTTGATTTAACCCACGTGTATGGATTAACTGAGGTATATGGTCCCGCAGCAGTCTGTGTAAA
GCAAGATGAATGGAATGACGTAGATATTGGTGAGCGCGCTCGCTTAAATGCACGTCAAGGTGTGCGTTATCACATGCAAC
AAGCGATTGATGTGATTGATCCAGAAACAATGCAGCCTGTACCAGCCGATGGTGAGACGATGGGCGAAATCATGTTTAAG
GGCAATATCGCGATGAAGGGATACTTGAAGAATGAAAAAGCGACCAAAGAAGCCTTTGAGGGTGGTTGGTTTCATTCTGG
AGATTTGGCAGTCAAAAATCCCGATGGTTATGTGAAGATGAAGGATCGCAGCAAGGACATTATTATTTCTGGTGGTGAAA
ACATCTCTTCTGTTGAGGTAGAGGATGTTCTCTATCGCCACCCAGCGGTTAATGCGGCTGCAGTCGTTGCTAAACCAGAC
CCTAAATGGGGCGAGACGCCTTGCACTTTCTTGGAAATCAAGCCTGGAGCTGAGGTGACTGTTGAGGAAATGATTGCCCA
CTGCAAGCAACATTTAGCCGGATTTAAGGTCCCCAGAGCCATTGTCTTCTGCGAGCTTCCTAAGACGTCCACTGGAAAAA
TTCAAAAGTTTGAATTGCGTAAGCAGGCTGGTTCAGCTGGGGCTATTGATGTCTAA

Protein sequence :
MMANIYEQGLERNPANYTPITPILFLERSAEIYPNKTAIIHGKLRQTWQQTYERCRRLASALQKRGIGLGDTVAVMLPNT
PPMVEAHFGIPMAGAVLNALNTRLDAESVAFMLNHGEAKVVIVDPEFSGVMKKALEIVKKDSGREILVIDVEEKEFDVPG
ECLGTVTYDQLLSEGDPEFPLIVPEDEWQAICLNYTSGTTGNPKGVVYHHRGAAINAVSNVLDWDINKHPIYLWTLPMFH
CNGWCFPWTIAARAGVNVCLRRVDAQHIFAAIKEHGVTHYCAAPIVHNLLVNAPDELKVGVPSGVKGLIAGAAPPASIIE
GMEKLGFDLTHVYGLTEVYGPAAVCVKQDEWNDVDIGERARLNARQGVRYHMQQAIDVIDPETMQPVPADGETMGEIMFK
GNIAMKGYLKNEKATKEAFEGGWFHSGDLAVKNPDGYVKMKDRSKDIIISGGENISSVEVEDVLYRHPAVNAAAVVAKPD
PKWGETPCTFLEIKPGAEVTVEEMIAHCKQHLAGFKVPRAIVFCELPKTSTGKIQKFELRKQAGSAGAIDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01500.1 AMP-binding protein domain Not tested PAGI-1 Protein 1e-122 48