Gene Information

Name : Pnuc_0292 (Pnuc_0292)
Accession : YP_001155077.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 284636 - 285553 bp
Length : 918 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: rso:RSc2544 probable integrase/recombinase

DNA sequence : 
ATGGCCACTCAGCTGCCTATACATCCTGCAAGCCAAGAGGCAATAGAGCGGTTTTGCGATGCCTGCTGGCTAGAAGATGG
TTTGGCAAAAAATAGTCTTTCAGCCTATCGCCGTGACTTATTGCTCCTAGCCCAGTGGCTATATCAACAGTCAGGTGTAG
ATCTTTATGCGGTTACAGAAAAAGATCTCACTGCTTATATAGCGCATCGCCGCGCTGATAAAGCCACTACAGCCAATCGG
CGTTTAACGGTATTCAAGCGTTTTTATCGCCATGCATTACGAATCAATTTAGTCAAGAGTGATCCTTGTATTGGACTCCG
TGCAGCCAAGCAAGCATTGCGTTTCCCAAAAACATTGAGTGAAGATCAGGTGACTGCTTTGCTTAATGCACCCGATATTG
AAACCCCATTAGGACTTCGCGATCGCACCATGCTCGAGCTCATGTATGCCAGCGGCCTACGCGTTTCAGAAATTGTTTCT
CTTAAAACGGTTGCACTAGGTTTGAATGAGGGCGTAGTTCGAGTGGTCAATGGCAAAGGTGGCAAGGAACGATTAGTGCC
TTTCGGCGGAGAAGCAGGGCAATGGTTAAGAAGGTATCTAGCGGAAGCGAGAACGCCATTGCTCGAGGGAAAAACAACTG
ATGCGGTATTTGTGGGTCGACACACTGGCACGGGGCTTACCCGTCAAGCATTTTGGGCGCTCATTAAGCGCTACGCGACC
GTAGCCAATATTCCTGTCGCTTTATCACCTCATACCCTCAGGCATGCTTTTGCCACCCATTTGCTGAATCATGGAGCGGA
TTTAAGGGTGGTGCAGCTATTGCTTGGGCACGCCGATATCTCCACTACCCAAATCTATACCCATGTCGCCAGAGAGCGCC
TGAAATCCATTCATCAGCAACATCACCCTCGCGGCTAG

Protein sequence : 
MATQLPIHPASQEAIERFCDACWLEDGLAKNSLSAYRRDLLLLAQWLYQQSGVDLYAVTEKDLTAYIAHRRADKATTANR
RLTVFKRFYRHALRINLVKSDPCIGLRAAKQALRFPKTLSEDQVTALLNAPDIETPLGLRDRTMLELMYASGLRVSEIVS
LKTVALGLNEGVVRVVNGKGGKERLVPFGGEAGQWLRRYLAEARTPLLEGKTTDAVFVGRHTGTGLTRQAFWALIKRYAT
VANIPVALSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKSIHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-46 50
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-46 50