|
Name : Pnuc_0227 (Pnuc_0227) Accession : YP_001155012.1 Strain : Polynucleobacter necessarius QLW-P1DMWA-1 Genome accession: NC_009379 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 225575 - 227548 bp Length : 1974 bp Strand : + Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: rso:RSc2750 transketolase DNA sequence : ATGGCCAATGCCATTCGTGCCTTATCCATGGATGCAGTTCAACAGGCAAATTCAGGTCACCCTGGTATGCCAATGGGAAT GGCAGACATTGCTGTTGGACTTTGGAACGAGCATTTAAAACATAACCCGACTGATCCGCATTGGATTGATCGCGACCGTT TTGTATTGTCCAACGGTCATGGTTCGATGTTGTTGTACTCGCTCCTACATCTCTCTGGTTATGACTTACCGATTGAAGAG TTAAAAAACTTCCGGCAATTACATAGTAAAACCCCAGGACACCCTGAGTATGGAATTACTCCTGGCGTTGAAACAACTAC CGGTCCACTCGGGCAAGGAATTTCAAATGCAGTGGGTATGGCCCTTGCAGAAAAATTATTAGCAGAAGAATTTAACCGCC CTGGTATGGACATCATTGATCATTACACCTACGTATTTTTGGGTGATGGATGTTTGATGGAGGGTATCAGTCATGAGGTT TGTTCTTTAGCTGGAACCTTAAAGCTCAATAAATTAATTGCCTTGTGGGATGACAACGGCATTTCAATCGATGGCAAAGT AGTTTCATGGTTCAACGAGGATACGCCGAAGCGCTTTGAAGCTTATGGTTGGAATGTCATTCGCGCTGTTGATGGGCATG ATGCTGAAGCAGTGTCAGCAGCGATTGCAAAAGCCAAAAAGAGTGACAAACCGACCTTGATTTGCTGCAAGACAGCGATT GGCCAAGGCTCGCCTAATATGGCTGGGAGCGACAAAGTGCATGGCTCCCCACTCGGTGCTGCTGAAATTGCAGCAACTCG TGTTGCCTTAAATTGGCCGTACGCACCTTTTGAAGTGCCTAAAGATATTTACACTGCATGGGATTTTAAAAAGCGTGGAC AAGCAGCAGAGCATGAGTGGAATAAAGAGTTTCAAAAATACAAAAATAAATATCCGGAATTGGCTTCTGAATTACAGCGT CGCATGGAAGGCGAGTTATCAAAAGATTTTTCAGCTACCTTAAATGCCTATTTAAAAACTTGCCAATCAAAAGCAGAAAC GATTGCCACACGTAAGGCAAGTCAAAATGCGATTGAGGCTTTGGCGCCAGCACTGCCAGAGTTTATGGGCGGATCTGCTG ACTTAACGGGTTCCAATCTAACCAACTGGTCAACCTGCAAAGCAGTGCGTGCTGATCAGTGGGGAAATCATATTAACTAT GGTGTGCGCGAATTTGGAATGAGTGCCATCATGAATGGCATTGCCTTACATGGCGGCTATATTCCTTTTGGCGGAACCTT CTTAACTTTCTCAGACTACAGTCGCAATGCCTTGCGCATGGCTGCCCTGATGAAATTGCGTAGCATCTTTGTATTTACTC ATGACTCTATTGGTCTGGGTGAAGATGGCCCAACCCATCAATCCGTAGAGCAAGTGGCCAGTTTGCGCTTGATCCCTAAT TTAATGGTTTGGCGTCCTTGCGACACTACTGAGAGTGCTGTGGCTTGGGGGGCGGCAATTGAGCGAAAAAATGGCCCTAG CGCCTTAATTTTTAGTCGTCAGAATTGCCCATTTGTATCCCGTACTGCGGCGCAAATTAAAGATATTGCGCGCGGTGGCT ATGTATTGCTTGATCCTCAATCTGGAAAAGTAGACGCAGTCATCATTGCTACCGGTTCTGAAATTGCACTGGCATTGCAA ACAGCGCAGCAGCTAGAAAAAGAAGGATTGGGTATTCGCATCGTTTCTATGCCATCAACCACTGTCTTTGATCAGCAAGA TGCTGCTTACAAATCAACAGTGTTGCCCGCCAAGATTCCACGTATTGCTGTTGAAGCTGGCGTCAGTGATTTCTGGTGGA AGTATGGATGCGCAGCAGTTCACGGTGTTGACACCTTCGGTGAGTCAGCGCCTGCACCACAACTGTATGAGTATTTTGGT TTAACGGCCGATCAGATTTCGAAAACTGTTAAGCAGTGCATTGCAAATAAATAA Protein sequence : MANAIRALSMDAVQQANSGHPGMPMGMADIAVGLWNEHLKHNPTDPHWIDRDRFVLSNGHGSMLLYSLLHLSGYDLPIEE LKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGISNAVGMALAEKLLAEEFNRPGMDIIDHYTYVFLGDGCLMEGISHEV CSLAGTLKLNKLIALWDDNGISIDGKVVSWFNEDTPKRFEAYGWNVIRAVDGHDAEAVSAAIAKAKKSDKPTLICCKTAI GQGSPNMAGSDKVHGSPLGAAEIAATRVALNWPYAPFEVPKDIYTAWDFKKRGQAAEHEWNKEFQKYKNKYPELASELQR RMEGELSKDFSATLNAYLKTCQSKAETIATRKASQNAIEALAPALPEFMGGSADLTGSNLTNWSTCKAVRADQWGNHINY GVREFGMSAIMNGIALHGGYIPFGGTFLTFSDYSRNALRMAALMKLRSIFVFTHDSIGLGEDGPTHQSVEQVASLRLIPN LMVWRPCDTTESAVAWGAAIERKNGPSALIFSRQNCPFVSRTAAQIKDIARGGYVLLDPQSGKVDAVIIATGSEIALALQ TAQQLEKEGLGIRIVSMPSTTVFDQQDAAYKSTVLPAKIPRIAVEAGVSDFWWKYGCAAVHGVDTFGESAPAPQLYEYFG LTADQISKTVKQCIANK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 65 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 60 |
