Gene Information

Name : Pnuc_0214 (Pnuc_0214)
Accession : YP_001154999.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 212253 - 212990 bp
Length : 738 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rme:Rmet_3057 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGATGGGCGATAGATTAAAAGACAAGATAGCGATTGTTACTGGTGCTGCAAAGGGTATCGGTTTTGCTACAGCTCTGCG
TTTTGCACAAGAGGGCGCCAAGGTAATGATTGCTGATATCAATCTAGAGGCCGTTAAGGGTGCAGCTGCAAAAATACCGA
ATGCGGAAGCTTATGCAATGAATGTGACGGATCGTGCCAGCATTCAAGCCACCGTTGGTGAGATCATGCAGCGTCATGGG
CGAATTGATATTCTCATTAATAACGCCGGTATCACTCAGGATGCGCGCTTGATTAAGATGACAGAAGCGCAATTTGACAC
GGTGATTGATGTCAATTTAAAAGGTGTATTTAATTGCACTCAATTAGTAGTCCCGCATATGTTGGAGGCTGGCTCTGGAG
CTATTGTGAATGCATCTAGCGTAGTTGGGCTATACGGAAATTTTGGCCAAACCAATTATTCAGCAACTAAATTTGGTGTG
ATTGGCTTTACAAAAACCTGGGCGCGCGAGTTAGGCCCTAAGGGTATACGGGTGAATGCTGTCTGCCCTGGATTTATTGC
CACAGAAATGGTGAAGGCTATGCCAGAAAATATCCTTCAGGATATCGAGCGCCGCAGCTGGCTTGGTCGTTTGGGTACAC
CAGAAGAAATGGCAAACGTATACCTATTTTTGGCAAGCGATGAGGCAAGCTACGTTAACGGAGTTGCATTAGAGGCTAGC
GGCGGGATCTCCCTCTAA

Protein sequence : 
MMGDRLKDKIAIVTGAAKGIGFATALRFAQEGAKVMIADINLEAVKGAAAKIPNAEAYAMNVTDRASIQATVGEIMQRHG
RIDILINNAGITQDARLIKMTEAQFDTVIDVNLKGVFNCTQLVVPHMLEAGSGAIVNASSVVGLYGNFGQTNYSATKFGV
IGFTKTWARELGPKGIRVNAVCPGFIATEMVKAMPENILQDIERRSWLGRLGTPEEMANVYLFLASDEASYVNGVALEAS
GGISL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 7e-39 44
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 9e-37 44
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 9e-37 44
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 4e-37 44
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 3e-37 44