Gene Information

Name : Pnuc_1903 (Pnuc_1903)
Accession : YP_001156679.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1981652 - 1982107 bp
Length : 456 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rme:Rmet_0315 single-strand binding protein

DNA sequence :
ATGGCTTCGGTAAATAAGGTCATCATCGTAGGTAACGTCGGACGTGATCCAGAAACGCGTTACATGCCAAGCGGCGACGC
CGTTACAAATATTTCAGTAGCAACTTCAGACCGCTACAAAGACAAACAAACTGGCGAAATGAAAGAAACCACAGAATGGC
ACCGCGTTGCATTCTTTGGCAAGCTTGCAGAAATCGCTGGTCAGTACCTTAAAAAAGGTTCACAGGTTTATGTTGAAGGT
CGTTTGCGCACCCGAAAATGGACTGACGCTAGTGGTCAAGAAAAATATTCCACTGAGATCGTTGCAGAAACTATGCAAAT
GCTTGGTGGTAAGCCAGTTGGCGGAAGTGGTGATGGTGGCGAAAGCTATGCGCGTTCAAAGCCGGCTGAGCAGTCTGCTC
CATCTGCATCGAATGCTGCATCACTTGGTGCAATGGATGACGATATTCCGTTTTAA

Protein sequence :
MASVNKVIIVGNVGRDPETRYMPSGDAVTNISVATSDRYKDKQTGEMKETTEWHRVAFFGKLAEIAGQYLKKGSQVYVEG
RLRTRKWTDASGQEKYSTEIVAETMQMLGGKPVGGSGDGGESYARSKPAEQSAPSASNAASLGAMDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-33 57
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-33 57
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 7e-34 57
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-34 53