Gene Information

Name : Pnuc_1678 (Pnuc_1678)
Accession : YP_001156455.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1743034 - 1743432 bp
Length : 399 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: mpt:Mpe_A1657 transcriptional regulator

DNA sequence : 
ATGAGAATTGGTGAACTAGCAACAGCCACAGGCATTCAAGTGGAAACTATTCGATTTTATGAGCAAGAGGGTTTGTTAGC
AAAACCGGCTCGATCTGAGGGTAACTTCCGAATCTACGGGGATCAGCACCTGCAACGCCTTACATTTATTCGCCACTGCC
GCTCGCTAGATATGACCTTAAGTGAAGTTCGTCAATTACTTCGCTTAAAAGATTTACCAGATGAAAACTGTGGTGCAGTA
AATGAATTGCTTGATGCTCATATTGAAGGTGTAAGCAATCGAATTAATGAGCTACGCCAACTTGAACGACAATTAAAGCT
GCTCAGAAAACAATGTCATGCGAATCAGGACTCAGCACACTGCGGGATCTTAAATAAATTATCGCTACCCGTGAAGTAA

Protein sequence : 
MRIGELATATGIQVETIRFYEQEGLLAKPARSEGNFRIYGDQHLQRLTFIRHCRSLDMTLSEVRQLLRLKDLPDENCGAV
NELLDAHIEGVSNRINELRQLERQLKLLRKQCHANQDSAHCGILNKLSLPVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 3e-29 59
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-27 47
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-27 47
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-27 47
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-27 47
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-27 47
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-27 47
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-27 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnuc_1678 YP_001156455.1 MerR family transcriptional regulator BAC0058 Protein 6e-31 59
Pnuc_1678 YP_001156455.1 MerR family transcriptional regulator BAC0301 Protein 6e-32 56