Gene Information

Name : Pnuc_1677 (Pnuc_1677)
Accession : YP_001156454.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1740755 - 1742935 bp
Length : 2181 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Aj

DNA sequence :
ATGAGCGAATGCAATACCTCCTGTAGTTGTTCTGCATCAACTCCTGTGACAAAGGCTTCTGAGATGCCGAGCAAGAATAA
GGCCATCTATCGCATTGAAAATATGGACTGTCCAACTGAAGAGGCGCTTATTCGCAAAAAGCTAGCGAGTGTAAGCGGCA
TTGAGTCGCTGGACTTTAACTTAATGCAAAGGATGCTCACGGTTGGTCACAATCTCAACTCACTTGACGCTATCGAGTCC
GCTTTGGGTTCAATTGGAATGCAGGCGGTGCTACAAAGTGGTGAGACTTCTACAAAGGGCGGCTCGATTGAGCCTATGCC
TAAAACCAATTGGTGGCCATTAGCTGTTGCAGGTATCACTGCAACCTTGGCTGAAATCATGGAATTGCTGCAACTTGGTA
ATCAGTGGATTGTCATCACTCTAGTAATCGCCTCAATTGCTTCGGGGGGCCTGACCACTTATAAAAAGGGCTGGATTGCA
TTAAAGAATAGCAATCTCAATATCAATGCCTTAATGTCAATTGCAGTCACAGGCGCGATGGCGATTGGAAGTTGGCCAGA
AGCCGCCATGGTGATGTTCTTATTTACTCTAGCTGAAGTAATTGAAGCCAAGTCATTAGATCGTGCTCGTAATGCGATTC
GTGGCTTATTAGACCTCACCCCTGAAACCGCAACCGTTCAGCAAGCCGATGGCTCTTGGGTGCTAACGGATGTAAAGGCT
ATCGCTTTAGGTGCTTTAGTTCGAGTGCGTCCTGGAGAGCGAATAGCTTTAGACGGCATATTAATAAGTGGTAACTCGGC
AGTAAATCAAGCGCCAATCACGGGTGAGAGCCTACCCGTCGATAAGATAGTTGGCGATGAGGTATTTGCAGGAACGATCA
ATCAGACGGGATCATTCGAATACAAAGTTACTGCAGAAGCGACTCATTCAACGCTAGCTCGAATTATTCATGCAGTTGAA
GCAGCGCAAGGAAGTCGTGCGCCCACCCAGCGTTTTGTTGATCAATTCGCCAAGATCTATGCGCCAGCTATTTTTTTGCT
TGCGGTGTTAGTCGCTGTTTTGCCTCCATTGTTAATGGCGCAGTCATGGCAGGAATGGATCTATAAAGCATTAGTCATGT
TAGTGATTGCCTGCCCTTGTGCTTTGGTGATCTCAACACCTGTAACGATTGTGAGTGGCTTAGCAGCCGCTGCAAGAAAA
GGCATCTTAATTAAAGGAGGTGCTTTTTTAGAAGCAGGACGGAGCATGAAGGTCTTAGCGCTCGATAAGACGGGGACGCT
CACCTACGGGAAGCCTGCACAAACGGACTTTTTTGTATTAAGTGGCAATGACAAGTATATTCACGAAATTGCTATCAGTC
TTGCGGCACGATCTGATCATCCCGTATCTCTAGCAATTGCCCATGCTAATCAAGAGCAAAAGAATGATTTAAAGACTGTG
GATAGCTTTGAGGCGATTCTGGGTCGCGGAGTCAAAGGCGTTATTGAAGGTAATTTGTATTACCTTGGCAATCATCGACT
GATTGAAGAATTGGGTTTGTGCTCTGATGATATTGAGAATCGTTTATTACCATTAGAGCAGCAAGGCAAAACGGCCGTAT
TGCTTACCAACCAAACAGAGGTTTTAGCCATTATTGCGGTAGCCGATACTGTTAGAGAAACAAGCAAGCAGGCTATTGAT
GAGCTTCACCAATTAGGCGTGACTACCATCATGCTCACTGGTGACAATCAGCACACCGCTAAGGCAATAGGTAAACAGGT
GGGTGTCGATGAGATTATGGGTAATTTATTGCCTGAAGATAAGCTTAAAATAATTGACAGTCGCCTAAAAAAGGATCCCA
ATGTAAAGGTAGGCATGGTTGGAGATGGCATTAATGATGCCCCTGCTTTAGCAAGAGCAAGTATTGGATTTGCGATGGGG
GCGGCTGGAACCGATACTGCGATAGAGACTGCTGATGTTGCGCTAATGGATGATGATTTACGCAAGATTGCTACCTTTAT
TCGGCTATCCAAATCAACCGCTCTAATTCTGACTCAAAACATTGTTCTTGCTCTAGGCATTAAGGCTATCTTCCTTGTGC
TTACCTTTACAGGGCAAGCCACGATGTGGATGGCGGTATTTGCGGATATGGGTGCGAGCTTGCTAGTGGTGGCAAATGGA
TTGCGGTTATTAAGAAGCTAG

Protein sequence :
MSECNTSCSCSASTPVTKASEMPSKNKAIYRIENMDCPTEEALIRKKLASVSGIESLDFNLMQRMLTVGHNLNSLDAIES
ALGSIGMQAVLQSGETSTKGGSIEPMPKTNWWPLAVAGITATLAEIMELLQLGNQWIVITLVIASIASGGLTTYKKGWIA
LKNSNLNINALMSIAVTGAMAIGSWPEAAMVMFLFTLAEVIEAKSLDRARNAIRGLLDLTPETATVQQADGSWVLTDVKA
IALGALVRVRPGERIALDGILISGNSAVNQAPITGESLPVDKIVGDEVFAGTINQTGSFEYKVTAEATHSTLARIIHAVE
AAQGSRAPTQRFVDQFAKIYAPAIFLLAVLVAVLPPLLMAQSWQEWIYKALVMLVIACPCALVISTPVTIVSGLAAAARK
GILIKGGAFLEAGRSMKVLALDKTGTLTYGKPAQTDFFVLSGNDKYIHEIAISLAARSDHPVSLAIAHANQEQKNDLKTV
DSFEAILGRGVKGVIEGNLYYLGNHRLIEELGLCSDDIENRLLPLEQQGKTAVLLTNQTEVLAIIAVADTVRETSKQAID
ELHQLGVTTIMLTGDNQHTAKAIGKQVGVDEIMGNLLPEDKLKIIDSRLKKDPNVKVGMVGDGINDAPALARASIGFAMG
AAGTDTAIETADVALMDDDLRKIATFIRLSKSTALILTQNIVLALGIKAIFLVLTFTGQATMWMAVFADMGASLLVVANG
LRLLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 68
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 1e-130 44
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 4e-131 44
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 4e-131 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnuc_1677 YP_001156454.1 heavy metal translocating P-type ATPase BAC0298 Protein 0.0 67