Gene Information

Name : Pnuc_1578 (Pnuc_1578)
Accession : YP_001156356.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 1650383 - 1651429 bp
Length : 1047 bp
Strand : -
Note : TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: dar:Daro_2636 arsenical-resistance protein ACR3

DNA sequence :
ATGAGTCAAGTTACCCAAAAACTGTCATTTCTAGATCGATACCTCACAGTTTGGATTTTCGCTGCGATGGCAGTAGGTAT
TGGCTTGGGATTTTTTGTGCCGAGTATTGAGGGCTTTATTAATCATTTTCAATCTGGTACTACCAATATTCCTATTGCTA
TTGGCTTGATTTTGATGATGTACCCACCGTTTGCTAAGGTGAAATATGAAGAATTGCCTGATGTCTTTAAGGACAAGCGA
ATCTTTGGATTGGCATTCTTGCTTAATTGGATCGTAGCCCCAACCTTGATGTTTTTCTTGGCTATTACCTTTGTACCCAA
TCAACCTGAATATATGGCCGGACTGATTTTGATTGGTATAGCGCCTTGTATCGCAATGGTCATTGTTTGGAATGATATTG
CCAAAGGCTCTACAGAGTATGCTGCAGGCTTAGTCGCATTTAATGCGGTATTCCAAGTTCTATTCTTCAGTCTGTATGCA
TATTTCTTCCTGACTGTGTTGCCACCATACTTTGGTTTCGCTGGTTCGGCAGTCAATATCACTATCGGTGAAATTGCTAA
AACAGTTGCAATTTACTTAGGCGTTCCTTGTGTAGCAGGATTTATGACTCGGTTTGTCATGCTCAAGTTTGTTAGCAAAG
AGTGGTATCAAAATATCTTTGTGCCAAAAATTGGCAAGATTACCTTGATTGCTTTGCTCTTCACGATCGTAGTCATGTTT
AGTTTGAAAGGTAAGTTAATTCTTCAACTACCAATGGATGTGGTCACTATTGCGATTCCCTTGCTAGTGTTTTTTGTGGT
GATGTTTGTATTAACTTTCTGGCTCACTATCAAAATGGGCATTGAGTACAAGCGTTGCTGTACTTTATCTTTTACAGCCT
CTAGCAATAATTTTGAGTTAGCAATTGCTGTCGCTATCGCAGTTTTCGGGATTAATTCAGGCGCTGCATTTGCGGCTGTA
ATTGGCCCCCTGGTTGAGGTGCCGATTATGGTGGGGCTAGTTTCAGTGGCGCTATGGCTTAAAGAGAGGGTTTTTCAGGC
GCAATGA

Protein sequence :
MSQVTQKLSFLDRYLTVWIFAAMAVGIGLGFFVPSIEGFINHFQSGTTNIPIAIGLILMMYPPFAKVKYEELPDVFKDKR
IFGLAFLLNWIVAPTLMFFLAITFVPNQPEYMAGLILIGIAPCIAMVIVWNDIAKGSTEYAAGLVAFNAVFQVLFFSLYA
YFFLTVLPPYFGFAGSAVNITIGEIAKTVAIYLGVPCVAGFMTRFVMLKFVSKEWYQNIFVPKIGKITLIALLFTIVVMF
SLKGKLILQLPMDVVTIAIPLLVFFVVMFVLTFWLTIKMGIEYKRCCTLSFTASSNNFELAIAVAIAVFGINSGAAFAAV
IGPLVEVPIMVGLVSVALWLKERVFQAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 4e-75 57
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 5e-89 57
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 4e-89 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnuc_1578 YP_001156356.1 arsenical-resistance protein BAC0573 Protein 1e-100 65
Pnuc_1578 YP_001156356.1 arsenical-resistance protein BAC0004 Protein 1e-70 49