Gene Information

Name : Pnuc_1467 (Pnuc_1467)
Accession : YP_001156245.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1544339 - 1545037 bp
Length : 699 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3699 lipoprotein releasing system, ATP-binding protein

DNA sequence : 
ATGAGTAAGGATATGAATTCATTTGTTTTGGTGGCCAAGGGTTTGGTGAAGACTTATGGCCAAGGACCTACTGCTGTGGA
TGTTCTCAAGTCGGTTGACTTAGAGGTATCCCTATCTGAGAAGGTGGCCATTGTTGGATCATCTGGCTCTGGAAAAAGTA
CGCTTTTGCACCTCTTGGGCGGTCTTGATACCCCAAGCGCCGGTTCCGTGATGTTGGCGGGCTCCAACCTCAGTACATTA
TCCGTTGCAAAGTTGGACCGCCTGCGCAATCACAGTTTGGGCTTTATCTATCAGTTCCATCATCTTTTGGATGAATTTAG
TGCAGCAGAAAACGTTGCTTTACCGTTGCGTATTCGTGGGCTAAGCAATGAAGAGTCCATGGATCGTGCTAGCAAAATAC
TTAAGGCCGTTGGTTTAGCCTCACGAGAGTTGCATACGCCTGGTGAGTTATCTGGTGGCGAGCGTCAACGGGTTGCGGTT
GCTAGAGCGCTCGTAGGTAATCCTGCTTGTGTGCTGGCTGATGAGCCTACCGGGAACTTAGATACCGAAACTGCCGATGG
GGTCTTTGATTTGATGTTGGATATTGCGCGTGAACAAGGTACTGCTTTTGTCATCGTGACCCATGACCCAGTCCGCGCTA
AACGTTGTGACCGTATTTTGCATTTAGAGCGTGGAGTATTAAAGACCTTTTCTCAATAG

Protein sequence : 
MSKDMNSFVLVAKGLVKTYGQGPTAVDVLKSVDLEVSLSEKVAIVGSSGSGKSTLLHLLGGLDTPSAGSVMLAGSNLSTL
SVAKLDRLRNHSLGFIYQFHHLLDEFSAAENVALPLRIRGLSNEESMDRASKILKAVGLASRELHTPGELSGGERQRVAV
ARALVGNPACVLADEPTGNLDTETADGVFDLMLDIAREQGTAFVIVTHDPVRAKRCDRILHLERGVLKTFSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnuc_1467 YP_001156245.1 ABC transporter NC_008702.1.4606598. Protein 2e-37 47
Pnuc_1467 YP_001156245.1 ABC transporter NC_012469.1.7686878. Protein 2e-38 45
Pnuc_1467 YP_001156245.1 ABC transporter CP001581.1.gene598.p Protein 2e-35 41