Gene Information

Name : Pnuc_0012 (Pnuc_0012)
Accession : YP_001154798.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 11742 - 12512 bp
Length : 771 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: ajs:Ajs_0231 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGGATATCAATCAGCTGTTTCGATTGGATAATAAAACCGCTTTTATAACGGGTGCGTCTAGCGGCATTGGCAAACACTG
CGCCATTCTATTGGCTCAGGCAGGCGCAAAGGTAGCTCTTGCTTCCCGGCGGGTTGATCAACTGCAATCCGTGGTTGATG
AAATCACTGGACTTGGTGGACAAGCCAAAGCTTTTGAGTTGGATGTAACAAATAACAAAAGTGTTGTTCGGTGTTTTGAT
GAGCTAACACATTGGGACATGCCAACAATCATCATTAACAATGCTGGCATGAGCGTCAACCGCAAACTTCTTGATCAAAC
TGAGGAAGATTGGGATCGAGTAATAGATACCAATCTAAAAGGGTCTTGGCTCGTTGCAACCGAGGCAGCTAGAAGACTTG
CCGCCACCAACACCCCTGGAAATATTGTGAATGTCGCTTCCATTTTGGGTGAGCGAATTATTGGTGGTGTTGCCCCTTAT
GTCATTTCCAAAGCAGGGGTTATTCAAAGTACCAAGGTGATGGCTTTAGAGTTGGCGCGGCAAGAGATTCGTGTAAATGC
ACTTTTACCCGGCTATGTTATTACCGATCTCAATCGAGATTTTTTATTAAGTGAGGCAGGACAGAAAATTCTGACCCGCA
TTCCTACGCGGCGTTTTAATAACCTAGAGGATCTCAATGGTCCACTTTTGTTGTTGGCCTCAGATGCAAGTAAAGCTATG
ACAGGCACGACTCTCGTGGTTGACAGCGGGCACCTCATCAGCGGGCTTTAA

Protein sequence :
MDINQLFRLDNKTAFITGASSGIGKHCAILLAQAGAKVALASRRVDQLQSVVDEITGLGGQAKAFELDVTNNKSVVRCFD
ELTHWDMPTIIINNAGMSVNRKLLDQTEEDWDRVIDTNLKGSWLVATEAARRLAATNTPGNIVNVASILGERIIGGVAPY
VISKAGVIQSTKVMALELARQEIRVNALLPGYVITDLNRDFLLSEAGQKILTRIPTRRFNNLEDLNGPLLLLASDASKAM
TGTTLVVDSGHLISGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-55 53