Gene Information

Name : YPDSF_3987 (YPDSF_3987)
Accession : YP_001154616.1
Strain :
Genome accession: NC_009377
Putative virulence/resistance : Virulence
Product : yopB/yopD chaperone
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG5010
EC number : -
Position : 38896 - 39402 bp
Length : 507 bp
Strand : +
Note : -

DNA sequence : 
ATGCAACAAGAGACGACAGACACTCAAGAATACCAGCTGGCAATGGAATCCTTCCTAAAAGGAGGGGGAACTATCGCCAT
GCTCAACGAAATTTCAAGTGACACTTTAGAGCAACTCTACTCTCTTGCATTTAACCAATACCAGTCAGGAAAATACGAGG
ATGCTCACAAGGTCTTTCAAGCTCTCTGTGTGCTAGACCACTATGATTCACGTTTCTTTTTAGGGCTAGGCGCTTGTCGT
CAAGCCATGGGGCAATACGACTTAGCGATTCATAGCTACAGCTATGGCGCCATAATGGATATAAAAGAACCTCGTTTTCC
GTTTCATGCGGCCGAATGTTTACTGCAAAAGGGAGAGCTTGCTGAAGCAGAAAGTGGCTTGTTCTTGGCTCAAGAGCTTA
TCGCAGACAAAACTGAGTTTAAGGAGCTTTCCACCCGAGTTAGCTCAATGTTAGAAGCAATTAAATTGAAAAAGGAGATG
GAACATGAGTGCGTTGATAACCCATGA

Protein sequence : 
MQQETTDTQEYQLAMESFLKGGGTIAMLNEISSDTLEQLYSLAFNQYQSGKYEDAHKVFQALCVLDHYDSRFFLGLGACR
QAMGQYDLAIHSYSYGAIMDIKEPRFPFHAAECLLQKGELAEAESGLFLAQELIADKTEFKELSTRVSSMLEAIKLKKEM
EHECVDNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssH AAO18054.1 LssH Virulence TTSS locus Protein 1e-47 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPDSF_3987 YP_001154616.1 yopB/yopD chaperone VFG0380 Protein 5e-75 100
YPDSF_3987 YP_001154616.1 yopB/yopD chaperone VFG0202 Protein 4e-45 57