Gene Information

Name : YPDSF_3979 (YPDSF_3979)
Accession : YP_001154608.1
Strain :
Genome accession: NC_009377
Putative virulence/resistance : Virulence
Product : Yop secretion and targeting protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 33708 - 33986 bp
Length : 279 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGTACGACCTTTCTGAGTTTATGGGAGATATTGTCGCACTGGTTGACAAGCGCTGGGCGGGGATTCATGACATTGA
ACATCTTGCCAACGCCTTTTCCCTTCCTACGCCTGAAATCAAAGTGCGTTTCTATCAAGATTTAAAAAGAATGTTTCGTC
TTTTCCCTCTGGGGGTATTTAGCGATGAGGAGCAACGGCAAAATTTATTGCAAATGTGTCAAAATGCGATCGATATGGCT
ATTGAGAGTGAAGAGGAAGAATTGAGTGAGTTGGATTGA

Protein sequence : 
MAYDLSEFMGDIVALVDKRWAGIHDIEHLANAFSLPTPEIKVRFYQDLKRMFRLFPLGVFSDEEQRQNLLQMCQNAIDMA
IESEEEELSELD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssA AAO18046.1 LssA Virulence TTSS locus Protein 2e-21 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPDSF_3979 YP_001154608.1 Yop secretion and targeting protein VFG0388 Protein 9e-35 100
YPDSF_3979 YP_001154608.1 Yop secretion and targeting protein VFG0194 Protein 3e-19 46