Gene Information

Name : YPDSF_3963 (YPDSF_3963)
Accession : YP_001154592.1
Strain :
Genome accession: NC_009377
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 19197 - 19544 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATATAAACTCAACGTACTGTTAGCAGAGATTGCTCTGATTGGAGCCGGCAACCACTACCACGAAGAAGCGAATTG
CATTGCTGAATGGTTACATTTGAAAGGTGAAGAAGAGGCGGTTCAATTGATTCGCCTTTCCTCTTTGATGAACCGTGGGG
ACTACGCAAGCGCCTTGCAACAAGGAAATAAATTAGCTTATCCTGATTTGGAACCTTGGTTAGCCTTATGTGAATATCGC
CTCGGGTTGGGGAGCGCCTTAGAGTCACGTTTAAATCGTCTCGCAAGGAGTCAGGATCCTAGAATACAGACATTTGTGAA
TGGAATGAGGGAGCAACTAAAAACATGA

Protein sequence : 
MKYKLNVLLAEIALIGAGNHYHEEANCIAEWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLAYPDLEPWLALCEYR
LGLGSALESRLNRLARSQDPRIQTFVNGMREQLKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscG AAO18030.1 LscG Virulence TTSS locus Protein 4e-27 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPDSF_3963 YP_001154592.1 type III secretion protein VFG0406 Protein 7e-49 99
YPDSF_3963 YP_001154592.1 type III secretion protein VFG0215 Protein 4e-24 54