Name : YPDSF_3960 (YPDSF_3960) Accession : YP_001154589.1 Strain : Genome accession: NC_009377 Putative virulence/resistance : Virulence Product : type III secretion lipoprotein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 17614 - 18348 bp Length : 735 bp Strand : - Note : - DNA sequence : GTGAAAGTTAAGACTTCACTGTCAACATTGATATTAATCTTGTTTTTAACTGGTTGCAAAGTTGATCTTTATACCGGAAT TAGTCAGAAGGAAGGGAACGAAATGCTTGCGCTGTTGCGCCAAGAAGGCCTTTCCGCAGACAAAGAGCCAGACAAAGATG GGAAGATTAAGCTCTTGGTTGAGGAGTCAGATGTCGCTCAGGCTATTGATATTCTCAAACGGAAGGGCTATCCACACGAG AGTTTCTCCACGTTACAGGATGTGTTCCCCAAAGATGGGTTGATATCTTCACCGATAGAAGAGTTGGCGAGGCTTAATTA TGCCAAGGCGCAAGAGATCTCCCGCACTTTATCTGAAATTGACGGGGTATTAGTGGCTCGAGTGCATGTCGTATTGCCTG AAGAGCAAAATAACAAAGGTAAGAAGGGTGTAGCAGCATCCGCTTCGGTTTTTATCAAGCATGCAGCAGATATTCAGTTT GATACCTACATACCTCAGATTAAACAATTAGTGAATAATAGTATTGAGGGGCTGGCCTATGATCGCATCAGTGTCATTTT GGTGCCATCGGTAGATGTTCGTCAAAGCTCTCATTTACCTCGTAACACGAGCATACTGTCAATTCAAGTGAGTGAAGAGT CAAAAGGGCATCTTATTGGCTTGTTGTCGTTGCTTATTTTGCTTTTGCCAGTGACCAATCTTGCTCAATATTTTTGGTTA CAACGCAAGAAGTGA Protein sequence : MKVKTSLSTLILILFLTGCKVDLYTGISQKEGNEMLALLRQEGLSADKEPDKDGKIKLLVEESDVAQAIDILKRKGYPHE SFSTLQDVFPKDGLISSPIEELARLNYAKAQEISRTLSEIDGVLVARVHVVLPEEQNNKGKKGVAASASVFIKHAADIQF DTYIPQIKQLVNNSIEGLAYDRISVILVPSVDVRQSSHLPRNTSILSIQVSEESKGHLIGLLSLLILLLPVTNLAQYFWL QRKK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 6e-76 | 76 |
hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 2e-26 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
YPDSF_3960 | YP_001154589.1 | type III secretion lipoprotein | VFG0409 | Protein | 9e-97 | 100 |
YPDSF_3960 | YP_001154589.1 | type III secretion lipoprotein | VFG0218 | Protein | 5e-73 | 74 |
YPDSF_3960 | YP_001154589.1 | type III secretion lipoprotein | VFG0051 | Protein | 1e-31 | 41 |