Gene Information

Name : hemC (Pars_2245)
Accession : YP_001154443.1
Strain : Pyrobaculum arsenaticum DSM 13514
Genome accession: NC_009376
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 2012207 - 2013100 bp
Length : 894 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGAGACTAGTAGTGGCAACTAGGGGGAGCAAGCTGAGCATGCTCCAAACAGAGGAGTTGCTCGCGCAGATAAAGGCCGT
TGAGCCTAGCATTGAGTTCGAGATAAAGATCGTGAAGACGACTGGAGATGAGGTACAAGACAAGCCGCTTTATCAGATAG
GGGTAAAGGGCATTTTCGAGAAGGAGGTAAACCTGGCGGTGCTGAGGGGCGAGGCGGATGTCGCTGTGCATTCGCTTAAG
GATCTCCCGTCGGAGCTTTCGCCGGGGCTTGTCCTCGCCGGGTTTTCTAAAAGGGCGCCGCCCTTCGATGCGGTAGTAAG
CACGGCTGGGTACGTCCTCGAAACGTTGCCCCGGGGCGCTTTGGTCGGCACCTCCAGCGTTAGGAGAGCTGAGTTCGTGA
AGGCTATCAGGCCCGATGTGAGGGTTGAGCCGCTGAGGGGGAACGTCGATACTAGGATCAACAAAATACTCCAGGGTAAG
TACGATGCTGCTATTATGGCAGTCGCCGGCATATATAGGCTATACGGAGCCTCGCCCCCCATAAAGCTGGCAGTCTTGAG
GCCTGAGGTCTTGCCCCCACCGCCAGGCCAGGGCATCGTCGCGGCCGTTGTGAGGGAGGCCGATAGTTGGTTAATTGATT
TGTTAAAGAAGGCGAGCGACCCCAAAGCCTCGTTGGAAGCAATTGCTGAGAGGGAATTCCTCAAGGCCGTGGGCGCCGGT
TGTCATGTGGCTATCGGAGGCGTGGCATTCGCTAGAAATGACACTGTGGAATTCATAGCGGGATACGCCTCCGGCGGCAG
GAAGTACATAGTCAGGGTTGTAGGCGACGACCCTGTTGAGGTGGGGCGGAGGGCCGCGGAGGAAATCCGTAAGTTTAAAG
ACGGAGACGTTTAG

Protein sequence :
MRLVVATRGSKLSMLQTEELLAQIKAVEPSIEFEIKIVKTTGDEVQDKPLYQIGVKGIFEKEVNLAVLRGEADVAVHSLK
DLPSELSPGLVLAGFSKRAPPFDAVVSTAGYVLETLPRGALVGTSSVRRAEFVKAIRPDVRVEPLRGNVDTRINKILQGK
YDAAIMAVAGIYRLYGASPPIKLAVLRPEVLPPPPGQGIVAAVVREADSWLIDLLKKASDPKASLEAIAEREFLKAVGAG
CHVAIGGVAFARNDTVEFIAGYASGGRKYIVRVVGDDPVEVGRRAAEEIRKFKDGDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-30 41
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-30 41