Gene Information

Name : ascJ (ASA_P5G050)
Accession : YP_001144272.1
Strain :
Genome accession: NC_009350
Putative virulence/resistance : Virulence
Product : AscJ protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 55011 - 55739 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGATGGGGGTGCTTGGCGCCTCGCTGCTGCTCAATGGCTGCAAAGTGGAGCTCTATACCGGGGTCACTCAGAAAGA
GGGCAACGAGATGCTAGCGCTGCTGCAAACCGAGGGGATCGCCTCGGACAAGCAGCCGGACAAGGATGGCCGCATCAAGC
TGCTGGTGGAGGAGTCTGACGTGGCACAGGCCATCGAGACCCTCAAACGCAAGGGCTATCCAAAAGAGAGCTTCTCCACT
CTGCAGGATGTGTTTCCCAAGGATGGCCTCATCTCTTCGCCCACCGAGGAGCGGGCTCGCCTCACCTATGCCAAGGCGCA
GGAGATCTCCAATACCCTGTCGGAAATAGACGGCGTGCTGGTGGCTCGTGTCCATGTGGTGCTGCCGGAAGGCAATGAAG
GGATCAGCAAGAAACCCTCTCCCGCATCGGCCTCGGTCTTTATCAAGCATGCGGCGGATATCCAACTCGATACTTACATT
CCGCAGATCAAACAGCTGGTCAACAACAGTATCGAGGGGCTCGCCTACGACCGGATCAGTGTGGTGCTGGTGCCCTCGGC
GGATGTGCGCCAGAGTCCGCTGATGGCGCGCAATACCTCGCTCTTCTCCATTGAAGTGGGCGAAGGTTCAAAATGGCGGC
TGGGCGGCTTGATTGCCCTGTTGCTGGCGCTGGTGGTAACCAGCAACCTGGCGCAATACATGTGGCACCGGAGCCGGAGT
CGCGGATGA

Protein sequence : 
MLMGVLGASLLLNGCKVELYTGVTQKEGNEMLALLQTEGIASDKQPDKDGRIKLLVEESDVAQAIETLKRKGYPKESFST
LQDVFPKDGLISSPTEERARLTYAKAQEISNTLSEIDGVLVARVHVVLPEGNEGISKKPSPASASVFIKHAADIQLDTYI
PQIKQLVNNSIEGLAYDRISVVLVPSADVRQSPLMARNTSLFSIEVGEGSKWRLGGLIALLLALVVTSNLAQYMWHRSRS
RG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscJ AAO18027.1 LscJ Virulence TTSS locus Protein 8e-82 77
XC_3009 YP_244077.1 HrcJ protein Virulence Hrp PAI Protein 9e-35 42
hrcJ NP_636607.1 HrcJ protein Virulence Hrp PAI Protein 9e-35 42
hrcJ AAB49174.1 HrcJ Virulence Hrp PAI Protein 1e-26 42
hrcJ AAB05080.1 HrcJ Virulence Hrp PAI Protein 2e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ascJ YP_001144272.1 AscJ protein VFG0218 Protein 2e-77 76
ascJ YP_001144272.1 AscJ protein VFG0409 Protein 5e-77 74
ascJ YP_001144272.1 AscJ protein VFG0051 Protein 9e-35 44