Gene Information

Name : rdgC (ASA_P4G040)
Accession : YP_001144091.1
Strain :
Genome accession: NC_009349
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 35886 - 36809 bp
Length : 924 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGGAGAGGCATATGTGGTTCAAAAACTTGAGCGTCTATCGTTTCACCCGTCCATTCGAGCTCACTGCGGAGCAGCTGGA
GACCCAGCTTGAAACCTGTGCTTTCACCCCCTGCGGTAGCCAGGACATTTCCAAGTTCGGCTGGGTTAAACCCCTTGGCA
AATTAGGATCGATGCTGACCCACTCAGCACAAGGCCACATCCTCATCTGCGCTCGCAAGGAAGAGAAGATCCTGCCGACA
GCCTTCGTTAACGAGCTGCTGGCCGAGAAGATCGAAGAAGTAGAGCATGAGCAGGGCCGAGCCCTCAAGAAGAAGGAAAA
GGCAGCTCTGAAAGAGGAACTGCTGCACACCCTGCTGCCTCGTGCATTCAGCCGCACAAACCAGACGATGGCTTGGCTGA
ACCCCGCGGAGAACCTGCTGGTGGTCGATAGCAGTTCTGCCAAGAAGGCGGACGATTTGCTGGCACTGCTGCGCAAGTCC
ATCGGCTCCCTGCCTGTGGTGCCGGTGGCCCTCAAGAACCCGCCCGAGATCACCATGACCGAGTGGCTGAACGAGGGTAA
TCTCCCCGCCAGCTTCACCCTGGAAGACGAAGCTGAACTGCGGAGCGCCATGGAGGAAGGAGGAATTATCCGCTGCAAGA
AACAGGACCTGATGACTGATGAGATCAAGCATCACCTGTCCAACGACAAACTGGTAACCAAGCTGGCCTTGAACTGGGGG
GATACCCTGAGCTTCGTACTGGGGGACGATCTTTCCATCAAGAGGCTCAAGTTCAGCGAGGAGCTGCGCGAGCAGAACGA
TGATGTGAGTAATGAAGACCCCGCGGCCCGGATTGATGCGGACTTTGCCCTGGTGACTGCTGAGCTGTCCCAGTTTATCC
CAGCCCTCTTTGCTGCCCTGGGGGGCGAGGAACAGGCTAAATAG

Protein sequence :
MERHMWFKNLSVYRFTRPFELTAEQLETQLETCAFTPCGSQDISKFGWVKPLGKLGSMLTHSAQGHILICARKEEKILPT
AFVNELLAEKIEEVEHEQGRALKKKEKAALKEELLHTLLPRAFSRTNQTMAWLNPAENLLVVDSSSAKKADDLLALLRKS
IGSLPVVPVALKNPPEITMTEWLNEGNLPASFTLEDEAELRSAMEEGGIIRCKKQDLMTDEIKHHLSNDKLVTKLALNWG
DTLSFVLGDDLSIKRLKFSEELREQNDDVSNEDPAARIDADFALVTAELSQFIPALFAALGGEEQAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 9e-56 48