|
Name : ASA_P4G171 (ASA_P4G171) Accession : YP_001144217.1 Strain : Genome accession: NC_009349 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 156184 - 158379 bp Length : 2196 bp Strand : + Note : - DNA sequence : ATGGATCTGTACATTTGCGAAAAGCCTTCACAGGCAAAAGATCTGGCCGGTGTGTTGAAGTTGACACAACGCGGTGACGG CTTCATCCATGACGGAGGCAAGCGCGTCATCACCTGGGCGTTCGGCCATCTGCTTGAGATGTATATGCCCGACGACTACG ACGAGAAATACAAGTCATGGTCTCTCGACTCTCTCCCCATTGCGCCGGAGTCATGGCAGAGCAAAGTTCGCCAGAAATCC GCCAAGCAGTACAAGATCATTGAGGGCTTGGTGAAAAAGGCCAGTACCGTCTACATCTCCACGGACTACGACCGCGAGGG CGAGGCCATCGCGAGATCCCTTTTAGACAGGTTCCGCTACTCAGGCCCGGTGCGCCGTGTTTGCCTGACAGCCCTGGATG AATCAAGCATCCGCAAAGCACTCAGCAATATCAAAGATGGTCAGGATACTGTGCCCCTGTACTACGCAGCCCTTGGGCGG CAACGTGCAGACTGGTTGATCGGCATGAACGTGAGCCGCCTCTATACCGTCCTGGCTCGACAAGTCGGTTTCGAGAGTAC ACTCCATGTTGGAAGGGTGATCACCCCTACTGTCGCTCTGGTGTGTCAGCGTGACCGGGATATTGCGGGCTTCACACCCT CGCCATACTGGGTGCTGGGCGTCAACGTTGCTGTTCAGAATGGGCAGTTTTTGGCGCAGTGGGTACCGCCCGAGGAGTGC AGCGACGATCAGGGCCGGTGTACCAATAAAGCCTATGCCGAGCAAGTCGCCTCCCAGATCAATGGGGCTCAAGCCGTCAT CAGTAAGGCGGAGACAAAACCCGGTAAAGAGTCGGCTCCCCTGCCATTTGACCTCACCGCCCTACAGCAGTACGGCAGCA AACGATGGGGCTATACCGCTCAGCAGGTGCTCGACGCTGCCCAATCTCTGTACGAAACGCACAAAGCCACTACCTATCCA CGAACCGACAGCCGGTATCTACCGGAGAGCCAGAAGGAGAACATCTCCGACATCCTCCAGGCGCTCATATTGTCCGATCA AAGGGTCTCCGGGCTGGTGGCCGGGGCTGACCCACATCGCAAGGCCAGGGTGTTCAATGACAGTAAAGTGTCCGCGCACC ACGCGATCATCCCGACACCAGCCAGAACGAACATCAGCGCCATGTCGGAGATCGAGCTCAACCTGTACGATGCGATCCGC CGCTTCTACATTGCGCAGTTCTACAGCGAGTTTGAGTTTTCCAAAACCGTCATTGAGGTGCAAAGTGGCCGTCACCTCTT CGCTGCGTCAGGCAAAACACCAACCAAGCAAGGCTGGAAGGTGTTGTTCACCTCTGACAGTGAGAGTGACCCGAAGGAAG AAGGTGAGGATGTCGATGCACTGATTGAGCAAGAGAAGTTACCCCGCGTCAGCCAAGGAGAACCGGCGTTATTGAAAGGG GCCGATCTTGCGAACAAAATGACCCGCCCCGCCCCGCATTTCACCGAAGCCACCCTCTTGGCCGCAATGGAGAACATCGC CAGATTCGTGACCGAGGAGAAGTTCAAGCAGATCCTCAAAGACACGGCAGGCCTAGGCACCCCAGCCACCCGAGCGAGCA TCATCCAGGGTGCCGTGGATAAGGGTTACTTCAAGCGTCAGAAAAAAGTGCTGATCGCCACTGAGAAGGCCCATGCGCTC ATAGCGGTACTACCACCAGCGATCAAGTCACCAGGGATGACGGCCGCCTGGGAGCAGGAACTTGAAAAAATCGCCACTGG CGCCGGGAACATGTCTGTCTTCATGAAACAGATCTCATCCTGGATATGCCAGATGGTCGAGCAGCTCAAGACGGCGGCCC CTGCTCTTACACAGGACGGAGGTGCAATGGTAAAGGCCTTTGCCGGGGCAAAACCCCAGCTGCATGTCTGCTTCAACTGC GGTGGGGAGACACTGATCCGGATCAAGGGGAAAAACGGGTTCTTCTGGGGTTGTAAGAACGAGGCTTGCAAGAAGACGTT CCCGGATAACAGAGGCAAACCAGAGAAAAGGATCGCGACTGAGGATTGCCCTGCCTGTCCGGACTGCGCCAGCCCGATGC GACTGAGGAAAGGCAAGGCACCTGGAAAAGTCAGAGCCACCAAGTTCTGGGGCTGCACAGGATACCCGGATTGCAAGACC ACGATGCCTTTCAAAAAGTCCGATTTTCAGGATTGA Protein sequence : MDLYICEKPSQAKDLAGVLKLTQRGDGFIHDGGKRVITWAFGHLLEMYMPDDYDEKYKSWSLDSLPIAPESWQSKVRQKS AKQYKIIEGLVKKASTVYISTDYDREGEAIARSLLDRFRYSGPVRRVCLTALDESSIRKALSNIKDGQDTVPLYYAALGR QRADWLIGMNVSRLYTVLARQVGFESTLHVGRVITPTVALVCQRDRDIAGFTPSPYWVLGVNVAVQNGQFLAQWVPPEEC SDDQGRCTNKAYAEQVASQINGAQAVISKAETKPGKESAPLPFDLTALQQYGSKRWGYTAQQVLDAAQSLYETHKATTYP RTDSRYLPESQKENISDILQALILSDQRVSGLVAGADPHRKARVFNDSKVSAHHAIIPTPARTNISAMSEIELNLYDAIR RFYIAQFYSEFEFSKTVIEVQSGRHLFAASGKTPTKQGWKVLFTSDSESDPKEEGEDVDALIEQEKLPRVSQGEPALLKG ADLANKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGAVDKGYFKRQKKVLIATEKAHAL IAVLPPAIKSPGMTAAWEQELEKIATGAGNMSVFMKQISSWICQMVEQLKTAAPALTQDGGAMVKAFAGAKPQLHVCFNC GGETLIRIKGKNGFFWGCKNEACKKTFPDNRGKPEKRIATEDCPACPDCASPMRLRKGKAPGKVRATKFWGCTGYPDCKT TMPFKKSDFQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 2e-130 | 44 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 2e-129 | 43 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 8e-132 | 43 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 8e-128 | 42 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 8e-128 | 42 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 6e-128 | 42 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 4e-138 | 42 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 7e-138 | 42 |
