Gene Information

Name : cat (ASA_P4G101)
Accession : YP_001144149.1
Strain :
Genome accession: NC_009349
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG4845
EC number : -
Position : 94643 - 95269 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence : 
ATGATGCAATTCACAAAGATTGATATAAATAATTGGACACGAAAAGAGTATTTCGACCACTATTTTGACAATACGCCCTG
CACATATAGTATGACGGTAAAACTCGATATTTCTAAGTTGAAAAAGGATGGAAAAAAATTATATCCGACTCTCTTATATG
GGGTTACAACAATCCTCAATCGACACGAAGAGTTCAGGACGGCATTAGATAAAAACGGACAGGTAGGTGTTTTTTCAGAA
ATGCTGCCTTGCTACACAATCTTTCATAAGGAAACTGAAACCTTTTCGAGTATTTGGACTGAGTTTACAGCAGACTATAC
TGAGTTTCTTCAGAACTATCAAAAGGATATAGACGCTTATGGTGAACGAAAGGGAATGTTCGCAAAGCCTAATCCTCCGG
AAAACACTTTCCCTGTTTCTATGATACCGTGGACAAGCTTTGAAGGCTTTAACTTAAATCTAAAAAAAGGATATGACTAT
CTACTGCCGATATTTACGTTTGGGAAGTATTATGAGGATGGCGGAAAATACTATATTCCCTTATCGATTCAAGTGCATCA
TGCCGTTTGTGATGGCTTTCATGTTTGCCGTTTTTTGGATGAATTACAAGACTTGCTGAATAAATAA

Protein sequence : 
MMQFTKIDINNWTRKEYFDHYFDNTPCTYSMTVKLDISKLKKDGKKLYPTLLYGVTTILNRHEEFRTALDKNGQVGVFSE
MLPCYTIFHKETETFSSIWTEFTADYTEFLQNYQKDIDAYGERKGMFAKPNPPENTFPVSMIPWTSFEGFNLNLKKGYDY
LLPIFTFGKYYEDGGKYYIPLSIQVHHAVCDGFHVCRFLDELQDLLNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cat YP_006098370.1 chloramphenicol acetyltransferase Not tested Tn2411 Protein 9e-44 46
cat CAJ77070.1 Chloramphenicol acetyltransferase Not tested AbaR1 Protein 6e-44 46
cat AAL08441.1 chloramphenicol acetyltransferase Not tested SRL Protein 1e-43 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_001144149.1 chloramphenicol acetyltransferase CP001581.1.gene2168. Protein 6e-51 51
cat YP_001144149.1 chloramphenicol acetyltransferase CP004022.1.gene799.p Protein 7e-42 46
cat YP_001144149.1 chloramphenicol acetyltransferase NC_010410.6002590.p0 Protein 3e-44 46
cat YP_001144149.1 chloramphenicol acetyltransferase NC_011586.7045194.p0 Protein 3e-44 46
cat YP_001144149.1 chloramphenicol acetyltransferase NC_010558.1.6276004. Protein 3e-44 46
cat YP_001144149.1 chloramphenicol acetyltransferase NC_010111.5787932.p0 Protein 3e-49 45
cat YP_001144149.1 chloramphenicol acetyltransferase NC_010427.6155852.p0 Protein 1e-39 44
cat YP_001144149.1 chloramphenicol acetyltransferase NC_010426.6155849.p0 Protein 1e-39 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_001144149.1 chloramphenicol acetyltransferase VFG1032 Protein 5e-44 45