Gene Information

Name : ASA_0452 (ASA_0452)
Accession : YP_001140373.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 463841 - 464569 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
TTGGTCAAGCAATCCTGGCTGGAAAGTGGTGCTGTCTACGGTTATCGCAAGATCCATCGCGATCTATGTGACTTGGGGGA
AGCCTGCGGCAAGCACCGTGTGGCCAAATTAATGAGGCGGGAGGGGCTGCGTTCGCAAACTGGCTATCAACGCCGTAAGG
GGCATTATGGAGGCAAGAGCCCACAGGCTGCCCCAAACACGCTGGCACGTCAATTTAAGGTGCCAGCCCCCAACATCTCC
TGGGTGACTGACATTACCTACATCCGAACTCAAGAAGGGTGGTTGTACCTGGCGGTGGTGCTCGATCTGTTTTCTCGCCA
GATCATCGGCTGGGCGATGAAGCCACGCATGACGGCAGGCTTGGCGGTTGATGCGTTATTGATGGCGGTTTGGCGACGTA
AGCCAACGCAGCCGGTACTGGTGCATTCGGATCAGGGCAGCCAGTTTACCGGTGGTGAATGGCAGGACTTTCTGAAGGCC
CACAACCTGAGTTGCAGTATGAGCCGACGTGGTAACTGCCACGACAATGCTGTCGCCGAGAGCTTCTTTCAGTTGCTCAA
ACGGGAGCGGATCAAGCGCAGGATTTACTCGACAAGAGACGAAGCCCGCAGCGACGTATTTGATTATATCGAAATGTTTT
ACAACCCAATCAGGCGCCATGGTTCCAATGATGGGCTGTCGCCGGTAGAGTTTGAAAGGCAGTTTATTTGTCAGCAACAG
AGTGTCTAG

Protein sequence : 
MVKQSWLESGAVYGYRKIHRDLCDLGEACGKHRVAKLMRREGLRSQTGYQRRKGHYGGKSPQAAPNTLARQFKVPAPNIS
WVTDITYIRTQEGWLYLAVVLDLFSRQIIGWAMKPRMTAGLAVDALLMAVWRRKPTQPVLVHSDQGSQFTGGEWQDFLKA
HNLSCSMSRRGNCHDNAVAESFFQLLKRERIKRRIYSTRDEARSDVFDYIEMFYNPIRRHGSNDGLSPVEFERQFICQQQ
SV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 5e-43 50
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-41 47
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-40 47
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 5e-41 47
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-39 44
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-39 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-34 43
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-34 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-34 43
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 2e-30 42
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 2e-30 42
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 2e-23 42
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 9e-31 42
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 9e-31 42
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 9e-31 42
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-30 42
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 9e-31 42
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-30 42
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 9e-31 42
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 9e-31 42
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-31 41
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 3e-31 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 2e-31 41
unnamed CAI43898.1 putative transposase Not tested LEE Protein 4e-32 41
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 4e-32 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASA_0452 YP_001140373.1 IS3 family transposase VFG1631 Protein 3e-43 50
ASA_0452 YP_001140373.1 IS3 family transposase VFG1484 Protein 1e-30 42
ASA_0452 YP_001140373.1 IS3 family transposase VFG1122 Protein 5e-31 42
ASA_0452 YP_001140373.1 IS3 family transposase VFG0785 Protein 1e-31 41